Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 TFAMP1-201ENST00000412727 736 ntBASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 RNA5SP410-201ENST00000516285 106 ntBASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 AL009178.2-201ENST00000597278 2719 ntBASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 AC136604.1-201ENST00000418535 575 ntBASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 LINC01225-203ENST00000563550 1244 ntBASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-3A0A0A0MS03 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.91□□□□□ -0.02
TRBV5-3A0A0A0MS03 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms