Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRB4X5D2U9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRB4X5D2U9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRB4X5D2U9 AC142381.3-201ENST00000568208 1670 ntBASIC17.55■□□□□ 0.4
HLA-DRB4X5D2U9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 AC087393.1-201ENST00000582896 145 ntBASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 AC022211.4-201ENST00000625094 2161 ntBASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 SLC6A10P-202ENST00000431994 2058 ntBASIC17.54■□□□□ 0.4
HLA-DRB4X5D2U9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRB4X5D2U9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HLA-DRB4X5D2U9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HLA-DRB4X5D2U9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.52■□□□□ 0.4
HLA-DRB4X5D2U9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRB4X5D2U9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.52■□□□□ 0.4
HLA-DRB4X5D2U9 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.52■□□□□ 0.4
HLA-DRB4X5D2U9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DRB4X5D2U9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HLA-DRB4X5D2U9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRB4X5D2U9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DRB4X5D2U9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DRB4X5D2U9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DRB4X5D2U9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DRB4X5D2U9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DRB4X5D2U9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DRB4X5D2U9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DRB4X5D2U9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.51■□□□□ 0.39
HLA-DRB4X5D2U9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DRB4X5D2U9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DRB4X5D2U9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DRB4X5D2U9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DRB4X5D2U9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DRB4X5D2U9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DRB4X5D2U9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DRB4X5D2U9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DRB4X5D2U9 FOXO3B-201ENST00000395675 1928 ntBASIC17.5■□□□□ 0.39
HLA-DRB4X5D2U9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DRB4X5D2U9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DRB4X5D2U9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DRB4X5D2U9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DRB4X5D2U9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HLA-DRB4X5D2U9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DRB4X5D2U9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DRB4X5D2U9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DRB4X5D2U9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DRB4X5D2U9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
HLA-DRB4X5D2U9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DRB4X5D2U9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DRB4X5D2U9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DRB4X5D2U9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DRB4X5D2U9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DRB4X5D2U9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DRB4X5D2U9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DRB4X5D2U9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms