Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
MACF1Q9UPN3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
MACF1Q9UPN3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC9.98□□□□□ -0.81
MACF1Q9UPN3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC9.98□□□□□ -0.81
MACF1Q9UPN3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC9.98□□□□□ -0.81
MACF1Q9UPN3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC9.98□□□□□ -0.81
MACF1Q9UPN3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC9.98□□□□□ -0.81
MACF1Q9UPN3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 AC011551.1-201ENST00000614101 683 ntBASIC9.97□□□□□ -0.81
MACF1Q9UPN3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 AC099791.1-201ENST00000416440 715 ntBASIC9.97□□□□□ -0.81
MACF1Q9UPN3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 WHAMMP3-201ENST00000611636 1609 ntBASIC9.97□□□□□ -0.81
MACF1Q9UPN3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 MIR4767-201ENST00000582827 78 ntBASIC9.97□□□□□ -0.81
MACF1Q9UPN3 AL359504.2-201ENST00000605506 1601 ntBASIC9.97□□□□□ -0.81
MACF1Q9UPN3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC9.97□□□□□ -0.81
MACF1Q9UPN3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC9.96□□□□□ -0.81
MACF1Q9UPN3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC9.96□□□□□ -0.81
MACF1Q9UPN3 GAK-223ENST00000628912 497 ntTSL 5 BASIC9.96□□□□□ -0.81
MACF1Q9UPN3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
MACF1Q9UPN3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC9.96□□□□□ -0.81
MACF1Q9UPN3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC9.96□□□□□ -0.81
MACF1Q9UPN3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC9.96□□□□□ -0.81
MACF1Q9UPN3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
MACF1Q9UPN3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
MACF1Q9UPN3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC9.96□□□□□ -0.81
MACF1Q9UPN3 AC073111.5-205ENST00000641717 521 ntBASIC9.96□□□□□ -0.81
MACF1Q9UPN3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC9.96□□□□□ -0.81
MACF1Q9UPN3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
MACF1Q9UPN3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
MACF1Q9UPN3 AL596275.1-201ENST00000423464 877 ntBASIC9.96□□□□□ -0.82
MACF1Q9UPN3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC9.96□□□□□ -0.82
MACF1Q9UPN3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC9.96□□□□□ -0.82
MACF1Q9UPN3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
MACF1Q9UPN3 SERBP1P1-201ENST00000396021 1160 ntBASIC9.96□□□□□ -0.82
MACF1Q9UPN3 AC123595.1-201ENST00000440769 1046 ntBASIC9.96□□□□□ -0.82
MACF1Q9UPN3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC9.96□□□□□ -0.82
MACF1Q9UPN3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC9.96□□□□□ -0.82
MACF1Q9UPN3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC9.96□□□□□ -0.82
MACF1Q9UPN3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
MACF1Q9UPN3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
MACF1Q9UPN3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
MACF1Q9UPN3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC9.96□□□□□ -0.82
MACF1Q9UPN3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
MACF1Q9UPN3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
MACF1Q9UPN3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC9.95□□□□□ -0.82
MACF1Q9UPN3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
MACF1Q9UPN3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC9.95□□□□□ -0.82
MACF1Q9UPN3 AC006015.1-201ENST00000429970 570 ntBASIC9.95□□□□□ -0.82
MACF1Q9UPN3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC9.95□□□□□ -0.82
MACF1Q9UPN3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
MACF1Q9UPN3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
MACF1Q9UPN3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
MACF1Q9UPN3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC9.95□□□□□ -0.82
MACF1Q9UPN3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC9.95□□□□□ -0.82
MACF1Q9UPN3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 NTF6G-201ENST00000591094 616 ntBASIC9.94□□□□□ -0.82
MACF1Q9UPN3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 MAX-217ENST00000557277 728 ntTSL 3 BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 KRT18P6-201ENST00000555540 1265 ntBASIC9.94□□□□□ -0.82
MACF1Q9UPN3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 AC004448.1-201ENST00000458332 883 ntBASIC9.94□□□□□ -0.82
MACF1Q9UPN3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MACF1Q9UPN3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MACF1Q9UPN3 TPRG1LP1-201ENST00000598702 760 ntBASIC9.93□□□□□ -0.82
MACF1Q9UPN3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
MACF1Q9UPN3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MACF1Q9UPN3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MACF1Q9UPN3 FAM201B-201ENST00000458407 597 ntBASIC9.93□□□□□ -0.82
MACF1Q9UPN3 AC008764.7-201ENST00000593779 1081 ntBASIC9.93□□□□□ -0.82
MACF1Q9UPN3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
MACF1Q9UPN3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
MACF1Q9UPN3 AC092118.2-201ENST00000613495 667 ntBASIC9.93□□□□□ -0.82
MACF1Q9UPN3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC9.93□□□□□ -0.82
MACF1Q9UPN3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
MACF1Q9UPN3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC9.93□□□□□ -0.82
MACF1Q9UPN3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MACF1Q9UPN3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
MACF1Q9UPN3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC9.92□□□□□ -0.82
MACF1Q9UPN3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC9.92□□□□□ -0.82
MACF1Q9UPN3 AP004607.4-201ENST00000530158 1459 ntBASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms