Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPA1Q9UND3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPA1Q9UND3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPA1Q9UND3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.59■■□□□ 1.05
NPIPA1Q9UND3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.59■■□□□ 1.05
NPIPA1Q9UND3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.59■■□□□ 1.05
NPIPA1Q9UND3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
NPIPA1Q9UND3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NPIPA1Q9UND3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
NPIPA1Q9UND3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.58■■□□□ 1.05
NPIPA1Q9UND3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.58■■□□□ 1.05
NPIPA1Q9UND3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
NPIPA1Q9UND3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.58■■□□□ 1.05
NPIPA1Q9UND3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NPIPA1Q9UND3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
NPIPA1Q9UND3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NPIPA1Q9UND3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NPIPA1Q9UND3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NPIPA1Q9UND3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPA1Q9UND3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.57■■□□□ 1.04
NPIPA1Q9UND3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPA1Q9UND3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
NPIPA1Q9UND3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NPIPA1Q9UND3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NPIPA1Q9UND3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPA1Q9UND3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NPIPA1Q9UND3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPA1Q9UND3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPA1Q9UND3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NPIPA1Q9UND3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.56■■□□□ 1.04
NPIPA1Q9UND3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPA1Q9UND3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPA1Q9UND3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NPIPA1Q9UND3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPA1Q9UND3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.55■■□□□ 1.04
NPIPA1Q9UND3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.55■■□□□ 1.04
NPIPA1Q9UND3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPA1Q9UND3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NPIPA1Q9UND3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.55■■□□□ 1.04
NPIPA1Q9UND3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPA1Q9UND3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.55■■□□□ 1.04
NPIPA1Q9UND3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 AC137630.3-201ENST00000607245 391 ntBASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NPIPA1Q9UND3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPA1Q9UND3 TSPY9P-201ENST00000440215 945 ntBASIC21.53■■□□□ 1.04
NPIPA1Q9UND3 TSPY11P-201ENST00000442607 1045 ntBASIC21.53■■□□□ 1.04
NPIPA1Q9UND3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPA1Q9UND3 UNC93B8-201ENST00000511903 705 ntBASIC21.53■■□□□ 1.04
NPIPA1Q9UND3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.53■■□□□ 1.04
NPIPA1Q9UND3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.53■■□□□ 1.04
NPIPA1Q9UND3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPA1Q9UND3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPA1Q9UND3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPA1Q9UND3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPA1Q9UND3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPIPA1Q9UND3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPIPA1Q9UND3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.52■■□□□ 1.04
NPIPA1Q9UND3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.52■■□□□ 1.04
NPIPA1Q9UND3 KRT16P3-201ENST00000439127 1283 ntBASIC21.52■■□□□ 1.04
NPIPA1Q9UND3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NPIPA1Q9UND3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.52■■□□□ 1.03
NPIPA1Q9UND3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
NPIPA1Q9UND3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.51■■□□□ 1.03
NPIPA1Q9UND3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
NPIPA1Q9UND3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
NPIPA1Q9UND3 AC096887.2-201ENST00000623443 1957 ntBASIC21.51■■□□□ 1.03
NPIPA1Q9UND3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPA1Q9UND3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.51■■□□□ 1.03
NPIPA1Q9UND3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPA1Q9UND3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.51■■□□□ 1.03
NPIPA1Q9UND3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.51■■□□□ 1.03
NPIPA1Q9UND3 AC020928.2-201ENST00000588717 2197 ntBASIC21.51■■□□□ 1.03
NPIPA1Q9UND3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPA1Q9UND3 AC008406.3-201ENST00000620001 1374 ntBASIC21.5■■□□□ 1.03
NPIPA1Q9UND3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
NPIPA1Q9UND3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPA1Q9UND3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.5■■□□□ 1.03
NPIPA1Q9UND3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.5■■□□□ 1.03
NPIPA1Q9UND3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.5■■□□□ 1.03
NPIPA1Q9UND3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.5■■□□□ 1.03
NPIPA1Q9UND3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPA1Q9UND3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPA1Q9UND3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPA1Q9UND3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPA1Q9UND3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPA1Q9UND3 AC021242.3-201ENST00000607598 1377 ntBASIC21.49■■□□□ 1.03
NPIPA1Q9UND3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPIPA1Q9UND3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms