Protein–RNA interactions for Protein: Q9H6Z4

RANBP3, Ran-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3Q9H6Z4 GPX1-201ENST00000419349 1106 ntBASIC20.21■□□□□ 0.83
RANBP3Q9H6Z4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RANBP3Q9H6Z4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RANBP3Q9H6Z4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
RANBP3Q9H6Z4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RANBP3Q9H6Z4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RANBP3Q9H6Z4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RANBP3Q9H6Z4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RANBP3Q9H6Z4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
RANBP3Q9H6Z4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RANBP3Q9H6Z4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RANBP3Q9H6Z4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 RARRES2P2-201ENST00000394842 485 ntBASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RANBP3Q9H6Z4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RANBP3Q9H6Z4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RANBP3Q9H6Z4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RANBP3Q9H6Z4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RANBP3Q9H6Z4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RANBP3Q9H6Z4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RANBP3Q9H6Z4 RNF126P1-201ENST00000567452 1320 ntBASIC20.17■□□□□ 0.82
RANBP3Q9H6Z4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RANBP3Q9H6Z4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RANBP3Q9H6Z4 AP003733.4-201ENST00000623785 1697 ntBASIC20.16■□□□□ 0.82
RANBP3Q9H6Z4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RANBP3Q9H6Z4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.16■□□□□ 0.82
RANBP3Q9H6Z4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.16■□□□□ 0.82
RANBP3Q9H6Z4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RANBP3Q9H6Z4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.16■□□□□ 0.82
RANBP3Q9H6Z4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.16■□□□□ 0.82
RANBP3Q9H6Z4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RANBP3Q9H6Z4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RANBP3Q9H6Z4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RANBP3Q9H6Z4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RANBP3Q9H6Z4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RANBP3Q9H6Z4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.14■□□□□ 0.81
RANBP3Q9H6Z4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RANBP3Q9H6Z4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RANBP3Q9H6Z4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RANBP3Q9H6Z4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.13■□□□□ 0.81
RANBP3Q9H6Z4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.13■□□□□ 0.81
RANBP3Q9H6Z4 AC022413.1-201ENST00000624602 984 ntBASIC20.13■□□□□ 0.81
RANBP3Q9H6Z4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RANBP3Q9H6Z4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
RANBP3Q9H6Z4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RANBP3Q9H6Z4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.12■□□□□ 0.81
RANBP3Q9H6Z4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RANBP3Q9H6Z4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms