Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZCCHC4Q9H5U6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZCCHC4Q9H5U6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.58■□□□□ 0.89
ZCCHC4Q9H5U6 AC004812.2-201ENST00000611079 2094 ntBASIC20.58■□□□□ 0.88
ZCCHC4Q9H5U6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZCCHC4Q9H5U6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZCCHC4Q9H5U6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZCCHC4Q9H5U6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.57■□□□□ 0.88
ZCCHC4Q9H5U6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZCCHC4Q9H5U6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ZCCHC4Q9H5U6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZCCHC4Q9H5U6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZCCHC4Q9H5U6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZCCHC4Q9H5U6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZCCHC4Q9H5U6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.57■□□□□ 0.88
ZCCHC4Q9H5U6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.57■□□□□ 0.88
ZCCHC4Q9H5U6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZCCHC4Q9H5U6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.57■□□□□ 0.88
ZCCHC4Q9H5U6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ZCCHC4Q9H5U6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZCCHC4Q9H5U6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZCCHC4Q9H5U6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.56■□□□□ 0.88
ZCCHC4Q9H5U6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.56■□□□□ 0.88
ZCCHC4Q9H5U6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.56■□□□□ 0.88
ZCCHC4Q9H5U6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZCCHC4Q9H5U6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZCCHC4Q9H5U6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZCCHC4Q9H5U6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC4Q9H5U6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC4Q9H5U6 AL157400.5-201ENST00000507624 621 ntBASIC20.55■□□□□ 0.88
ZCCHC4Q9H5U6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC4Q9H5U6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ZCCHC4Q9H5U6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZCCHC4Q9H5U6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ZCCHC4Q9H5U6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC4Q9H5U6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC4Q9H5U6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC4Q9H5U6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZCCHC4Q9H5U6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZCCHC4Q9H5U6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZCCHC4Q9H5U6 AC025884.2-201ENST00000553429 711 ntBASIC20.54■□□□□ 0.88
ZCCHC4Q9H5U6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZCCHC4Q9H5U6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZCCHC4Q9H5U6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
ZCCHC4Q9H5U6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC4Q9H5U6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC4Q9H5U6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC4Q9H5U6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC4Q9H5U6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.53■□□□□ 0.88
ZCCHC4Q9H5U6 MIR3960-201ENST00000583311 91 ntBASIC20.53■□□□□ 0.88
ZCCHC4Q9H5U6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC4Q9H5U6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
ZCCHC4Q9H5U6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.53■□□□□ 0.88
ZCCHC4Q9H5U6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZCCHC4Q9H5U6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.52■□□□□ 0.88
ZCCHC4Q9H5U6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZCCHC4Q9H5U6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.52■□□□□ 0.88
ZCCHC4Q9H5U6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.52■□□□□ 0.88
ZCCHC4Q9H5U6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZCCHC4Q9H5U6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZCCHC4Q9H5U6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZCCHC4Q9H5U6 AC060814.1-201ENST00000554326 538 ntBASIC20.51■□□□□ 0.87
ZCCHC4Q9H5U6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZCCHC4Q9H5U6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZCCHC4Q9H5U6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZCCHC4Q9H5U6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 SMPD5-203ENST00000639008 1464 ntBASIC20.5■□□□□ 0.87
ZCCHC4Q9H5U6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.49■□□□□ 0.87
ZCCHC4Q9H5U6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.49■□□□□ 0.87
ZCCHC4Q9H5U6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
ZCCHC4Q9H5U6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZCCHC4Q9H5U6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZCCHC4Q9H5U6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZCCHC4Q9H5U6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZCCHC4Q9H5U6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ZCCHC4Q9H5U6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZCCHC4Q9H5U6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.48■□□□□ 0.87
ZCCHC4Q9H5U6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.48■□□□□ 0.87
ZCCHC4Q9H5U6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZCCHC4Q9H5U6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms