Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.47■□□□□ 0.55
TMEM116Q8NCL8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM116Q8NCL8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.46■□□□□ 0.55
TMEM116Q8NCL8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TMEM116Q8NCL8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM116Q8NCL8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TMEM116Q8NCL8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.46■□□□□ 0.55
TMEM116Q8NCL8 AC093536.1-201ENST00000569153 554 ntBASIC18.46■□□□□ 0.55
TMEM116Q8NCL8 MIR6089-201ENST00000616698 64 ntBASIC18.46■□□□□ 0.55
TMEM116Q8NCL8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM116Q8NCL8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM116Q8NCL8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TMEM116Q8NCL8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM116Q8NCL8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM116Q8NCL8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM116Q8NCL8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM116Q8NCL8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM116Q8NCL8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM116Q8NCL8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM116Q8NCL8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TMEM116Q8NCL8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.45■□□□□ 0.54
TMEM116Q8NCL8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM116Q8NCL8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM116Q8NCL8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM116Q8NCL8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM116Q8NCL8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM116Q8NCL8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM116Q8NCL8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM116Q8NCL8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 KRT18P10-201ENST00000388836 1287 ntBASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 RNF126P1-201ENST00000567452 1320 ntBASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TMEM116Q8NCL8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
TMEM116Q8NCL8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM116Q8NCL8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TMEM116Q8NCL8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM116Q8NCL8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM116Q8NCL8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.42■□□□□ 0.54
TMEM116Q8NCL8 AC007029.1-201ENST00000604183 313 ntBASIC18.42■□□□□ 0.54
TMEM116Q8NCL8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.42■□□□□ 0.54
TMEM116Q8NCL8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM116Q8NCL8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM116Q8NCL8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM116Q8NCL8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM116Q8NCL8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TMEM116Q8NCL8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM116Q8NCL8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM116Q8NCL8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
TMEM116Q8NCL8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM116Q8NCL8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM116Q8NCL8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM116Q8NCL8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.4■□□□□ 0.54
TMEM116Q8NCL8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM116Q8NCL8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM116Q8NCL8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TMEM116Q8NCL8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TMEM116Q8NCL8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM116Q8NCL8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM116Q8NCL8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM116Q8NCL8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM116Q8NCL8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM116Q8NCL8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM116Q8NCL8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM116Q8NCL8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM116Q8NCL8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TMEM116Q8NCL8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM116Q8NCL8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM116Q8NCL8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM116Q8NCL8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM116Q8NCL8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM116Q8NCL8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM116Q8NCL8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM116Q8NCL8 RAP2CP1-202ENST00000605179 643 ntBASIC18.38■□□□□ 0.53
TMEM116Q8NCL8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM116Q8NCL8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM116Q8NCL8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms