Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
EXD3Q8N9H8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.14■■□□□ 1.13
EXD3Q8N9H8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
EXD3Q8N9H8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
EXD3Q8N9H8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
EXD3Q8N9H8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
EXD3Q8N9H8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
EXD3Q8N9H8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
EXD3Q8N9H8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
EXD3Q8N9H8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.12■■□□□ 1.13
EXD3Q8N9H8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EXD3Q8N9H8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EXD3Q8N9H8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
EXD3Q8N9H8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.12■■□□□ 1.13
EXD3Q8N9H8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.12■■□□□ 1.13
EXD3Q8N9H8 AP004609.3-201ENST00000610705 1884 ntBASIC22.12■■□□□ 1.13
EXD3Q8N9H8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EXD3Q8N9H8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
EXD3Q8N9H8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EXD3Q8N9H8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
EXD3Q8N9H8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
EXD3Q8N9H8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
EXD3Q8N9H8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
EXD3Q8N9H8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
EXD3Q8N9H8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
EXD3Q8N9H8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.11■■□□□ 1.13
EXD3Q8N9H8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.11■■□□□ 1.13
EXD3Q8N9H8 MIR4281-201ENST00000580852 62 ntBASIC22.11■■□□□ 1.13
EXD3Q8N9H8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.11■■□□□ 1.13
EXD3Q8N9H8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.11■■□□□ 1.13
EXD3Q8N9H8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.1■■□□□ 1.13
EXD3Q8N9H8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
EXD3Q8N9H8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
EXD3Q8N9H8 AL512631.2-201ENST00000604634 923 ntBASIC22.1■■□□□ 1.13
EXD3Q8N9H8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
EXD3Q8N9H8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
EXD3Q8N9H8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 MTDHP2-201ENST00000601468 714 ntBASIC22.09■■□□□ 1.13
EXD3Q8N9H8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EXD3Q8N9H8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
EXD3Q8N9H8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.08■■□□□ 1.13
EXD3Q8N9H8 AC145676.1-201ENST00000514988 2004 ntBASIC22.08■■□□□ 1.13
EXD3Q8N9H8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
EXD3Q8N9H8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.08■■□□□ 1.13
EXD3Q8N9H8 AC104564.3-201ENST00000582367 638 ntBASIC22.08■■□□□ 1.13
EXD3Q8N9H8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.08■■□□□ 1.13
EXD3Q8N9H8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
EXD3Q8N9H8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.07■■□□□ 1.12
EXD3Q8N9H8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
EXD3Q8N9H8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
EXD3Q8N9H8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
EXD3Q8N9H8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
EXD3Q8N9H8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
EXD3Q8N9H8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
EXD3Q8N9H8 PBX2P1-201ENST00000493219 1291 ntBASIC22.06■■□□□ 1.12
EXD3Q8N9H8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.06■■□□□ 1.12
EXD3Q8N9H8 AC142381.2-201ENST00000566120 298 ntBASIC22.06■■□□□ 1.12
EXD3Q8N9H8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
EXD3Q8N9H8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
EXD3Q8N9H8 AC142472.1-201ENST00000612013 1741 ntBASIC22.06■■□□□ 1.12
EXD3Q8N9H8 AC135279.3-201ENST00000610945 1311 ntBASIC22.06■■□□□ 1.12
EXD3Q8N9H8 AC106739.1-201ENST00000617035 715 ntBASIC22.05■■□□□ 1.12
EXD3Q8N9H8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.05■■□□□ 1.12
EXD3Q8N9H8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
EXD3Q8N9H8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
EXD3Q8N9H8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.04■■□□□ 1.12
EXD3Q8N9H8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.04■■□□□ 1.12
EXD3Q8N9H8 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.04■■□□□ 1.12
EXD3Q8N9H8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
EXD3Q8N9H8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
EXD3Q8N9H8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
EXD3Q8N9H8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
EXD3Q8N9H8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
EXD3Q8N9H8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
EXD3Q8N9H8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
EXD3Q8N9H8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
EXD3Q8N9H8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.03■■□□□ 1.12
EXD3Q8N9H8 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.03■■□□□ 1.12
EXD3Q8N9H8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
EXD3Q8N9H8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
EXD3Q8N9H8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.02■■□□□ 1.12
EXD3Q8N9H8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.02■■□□□ 1.12
EXD3Q8N9H8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.02■■□□□ 1.12
EXD3Q8N9H8 DUSP8P4-201ENST00000399538 1761 ntBASIC22.02■■□□□ 1.11
EXD3Q8N9H8 AC092803.2-201ENST00000564287 1899 ntBASIC22.01■■□□□ 1.11
EXD3Q8N9H8 MIR5787-201ENST00000611784 55 ntBASIC22.01■■□□□ 1.11
EXD3Q8N9H8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.01■■□□□ 1.11
EXD3Q8N9H8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
EXD3Q8N9H8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms