Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 AC096887.2-201ENST00000623443 1957 ntBASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL27A1Q8IZC6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL27A1Q8IZC6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL27A1Q8IZC6 RARRES2P6-201ENST00000567333 442 ntBASIC22.54■■□□□ 1.2
COL27A1Q8IZC6 FOXO3B-201ENST00000395675 1928 ntBASIC22.54■■□□□ 1.2
COL27A1Q8IZC6 ZNRF2P3-201ENST00000424200 374 ntBASIC22.54■■□□□ 1.2
COL27A1Q8IZC6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.54■■□□□ 1.2
COL27A1Q8IZC6 AL031432.3-201ENST00000607698 485 ntBASIC22.54■■□□□ 1.2
COL27A1Q8IZC6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.54■■□□□ 1.2
COL27A1Q8IZC6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL27A1Q8IZC6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.53■■□□□ 1.2
COL27A1Q8IZC6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.53■■□□□ 1.2
COL27A1Q8IZC6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.53■■□□□ 1.2
COL27A1Q8IZC6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
COL27A1Q8IZC6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL27A1Q8IZC6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.52■■□□□ 1.2
COL27A1Q8IZC6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.52■■□□□ 1.2
COL27A1Q8IZC6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.52■■□□□ 1.2
COL27A1Q8IZC6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL27A1Q8IZC6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.52■■□□□ 1.2
COL27A1Q8IZC6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL27A1Q8IZC6 AC133561.4-201ENST00000566112 224 ntBASIC22.51■■□□□ 1.19
COL27A1Q8IZC6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.51■■□□□ 1.19
COL27A1Q8IZC6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL27A1Q8IZC6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.51■■□□□ 1.19
COL27A1Q8IZC6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
COL27A1Q8IZC6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.51■■□□□ 1.19
COL27A1Q8IZC6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL27A1Q8IZC6 AC106739.1-201ENST00000617035 715 ntBASIC22.5■■□□□ 1.19
COL27A1Q8IZC6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.5■■□□□ 1.19
COL27A1Q8IZC6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.5■■□□□ 1.19
COL27A1Q8IZC6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.5■■□□□ 1.19
COL27A1Q8IZC6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL27A1Q8IZC6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.49■■□□□ 1.19
COL27A1Q8IZC6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL27A1Q8IZC6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.49■■□□□ 1.19
COL27A1Q8IZC6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL27A1Q8IZC6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL27A1Q8IZC6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.48■■□□□ 1.19
COL27A1Q8IZC6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.48■■□□□ 1.19
COL27A1Q8IZC6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.48■■□□□ 1.19
COL27A1Q8IZC6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.48■■□□□ 1.19
COL27A1Q8IZC6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.48■■□□□ 1.19
COL27A1Q8IZC6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.48■■□□□ 1.19
COL27A1Q8IZC6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.48■■□□□ 1.19
COL27A1Q8IZC6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.48■■□□□ 1.19
COL27A1Q8IZC6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.48■■□□□ 1.19
COL27A1Q8IZC6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL27A1Q8IZC6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL27A1Q8IZC6 AC005837.3-201ENST00000612163 286 ntBASIC22.47■■□□□ 1.19
COL27A1Q8IZC6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL27A1Q8IZC6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.47■■□□□ 1.19
COL27A1Q8IZC6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.47■■□□□ 1.19
COL27A1Q8IZC6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL27A1Q8IZC6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL27A1Q8IZC6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL27A1Q8IZC6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL27A1Q8IZC6 AC026271.2-201ENST00000428091 497 ntBASIC22.46■■□□□ 1.19
COL27A1Q8IZC6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
COL27A1Q8IZC6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
COL27A1Q8IZC6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL27A1Q8IZC6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
COL27A1Q8IZC6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL27A1Q8IZC6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL27A1Q8IZC6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL27A1Q8IZC6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL27A1Q8IZC6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL27A1Q8IZC6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.44■■□□□ 1.18
COL27A1Q8IZC6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
COL27A1Q8IZC6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.43■■□□□ 1.18
COL27A1Q8IZC6 ERN1-208ENST00000606895 2068 ntBASIC22.42■■□□□ 1.18
COL27A1Q8IZC6 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.42■■□□□ 1.18
COL27A1Q8IZC6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL27A1Q8IZC6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.42■■□□□ 1.18
COL27A1Q8IZC6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
COL27A1Q8IZC6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.42■■□□□ 1.18
COL27A1Q8IZC6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL27A1Q8IZC6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL27A1Q8IZC6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL27A1Q8IZC6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
COL27A1Q8IZC6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL27A1Q8IZC6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
COL27A1Q8IZC6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
COL27A1Q8IZC6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL27A1Q8IZC6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL27A1Q8IZC6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.41■■□□□ 1.18
COL27A1Q8IZC6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.41■■□□□ 1.18
COL27A1Q8IZC6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.41■■□□□ 1.18
COL27A1Q8IZC6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 1519.6 ms