Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC30.52■■■□□ 2.48
RGPD4Q7Z3J3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RGPD4Q7Z3J3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RGPD4Q7Z3J3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RGPD4Q7Z3J3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC30.51■■■□□ 2.48
RGPD4Q7Z3J3 MIR4767-201ENST00000582827 78 ntBASIC30.51■■■□□ 2.48
RGPD4Q7Z3J3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.48
RGPD4Q7Z3J3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
RGPD4Q7Z3J3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC30.5■■■□□ 2.47
RGPD4Q7Z3J3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC30.5■■■□□ 2.47
RGPD4Q7Z3J3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RGPD4Q7Z3J3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
RGPD4Q7Z3J3 BX255925.1-201ENST00000566954 1854 ntBASIC30.49■■■□□ 2.47
RGPD4Q7Z3J3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
RGPD4Q7Z3J3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
RGPD4Q7Z3J3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC30.49■■■□□ 2.47
RGPD4Q7Z3J3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RGPD4Q7Z3J3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RGPD4Q7Z3J3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RGPD4Q7Z3J3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
RGPD4Q7Z3J3 AC004448.1-201ENST00000458332 883 ntBASIC30.48■■■□□ 2.47
RGPD4Q7Z3J3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC30.48■■■□□ 2.47
RGPD4Q7Z3J3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.48■■■□□ 2.47
RGPD4Q7Z3J3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.47■■■□□ 2.47
RGPD4Q7Z3J3 MAG-206ENST00000597035 542 ntTSL 4 BASIC30.47■■■□□ 2.47
RGPD4Q7Z3J3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
RGPD4Q7Z3J3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
RGPD4Q7Z3J3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
RGPD4Q7Z3J3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC30.46■■■□□ 2.47
RGPD4Q7Z3J3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
RGPD4Q7Z3J3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
RGPD4Q7Z3J3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC30.46■■■□□ 2.47
RGPD4Q7Z3J3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.45■■■□□ 2.47
RGPD4Q7Z3J3 AC034268.1-201ENST00000441047 882 ntBASIC30.45■■■□□ 2.46
RGPD4Q7Z3J3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC30.45■■■□□ 2.46
RGPD4Q7Z3J3 AC142472.1-201ENST00000612013 1741 ntBASIC30.44■■■□□ 2.46
RGPD4Q7Z3J3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC30.44■■■□□ 2.46
RGPD4Q7Z3J3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.44■■■□□ 2.46
RGPD4Q7Z3J3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
RGPD4Q7Z3J3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
RGPD4Q7Z3J3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC30.43■■■□□ 2.46
RGPD4Q7Z3J3 KRT18P5-201ENST00000436075 1291 ntBASIC30.43■■■□□ 2.46
RGPD4Q7Z3J3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.43■■■□□ 2.46
RGPD4Q7Z3J3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
RGPD4Q7Z3J3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RGPD4Q7Z3J3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC30.43■■■□□ 2.46
RGPD4Q7Z3J3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
RGPD4Q7Z3J3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC30.43■■■□□ 2.46
RGPD4Q7Z3J3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.43■■■□□ 2.46
RGPD4Q7Z3J3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.42■■■□□ 2.46
RGPD4Q7Z3J3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
RGPD4Q7Z3J3 AC011298.3-201ENST00000615796 283 ntBASIC30.42■■■□□ 2.46
RGPD4Q7Z3J3 AC092437.1-201ENST00000624794 1048 ntBASIC30.42■■■□□ 2.46
RGPD4Q7Z3J3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RGPD4Q7Z3J3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
RGPD4Q7Z3J3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
RGPD4Q7Z3J3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.41■■■□□ 2.46
RGPD4Q7Z3J3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.41■■■□□ 2.46
RGPD4Q7Z3J3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
RGPD4Q7Z3J3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RGPD4Q7Z3J3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RGPD4Q7Z3J3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RGPD4Q7Z3J3 IRS3P-201ENST00000223076 1006 ntBASIC30.41■■■□□ 2.46
RGPD4Q7Z3J3 PTCHD3P2-201ENST00000424937 1205 ntBASIC30.41■■■□□ 2.46
RGPD4Q7Z3J3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.41■■■□□ 2.46
RGPD4Q7Z3J3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC30.41■■■□□ 2.46
RGPD4Q7Z3J3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC30.4■■■□□ 2.46
RGPD4Q7Z3J3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RGPD4Q7Z3J3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RGPD4Q7Z3J3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RGPD4Q7Z3J3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RGPD4Q7Z3J3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC30.39■■■□□ 2.46
RGPD4Q7Z3J3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
RGPD4Q7Z3J3 AL137784.2-201ENST00000607332 1000 ntBASIC30.39■■■□□ 2.46
RGPD4Q7Z3J3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC30.39■■■□□ 2.45
RGPD4Q7Z3J3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RGPD4Q7Z3J3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC30.38■■■□□ 2.45
RGPD4Q7Z3J3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
RGPD4Q7Z3J3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RGPD4Q7Z3J3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC30.38■■■□□ 2.45
RGPD4Q7Z3J3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RGPD4Q7Z3J3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.37■■■□□ 2.45
RGPD4Q7Z3J3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
RGPD4Q7Z3J3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
RGPD4Q7Z3J3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
RGPD4Q7Z3J3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
RGPD4Q7Z3J3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RGPD4Q7Z3J3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
RGPD4Q7Z3J3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC30.36■■■□□ 2.45
RGPD4Q7Z3J3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
RGPD4Q7Z3J3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
RGPD4Q7Z3J3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC30.36■■■□□ 2.45
RGPD4Q7Z3J3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.36■■■□□ 2.45
RGPD4Q7Z3J3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC30.36■■■□□ 2.45
RGPD4Q7Z3J3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC30.35■■■□□ 2.45
RGPD4Q7Z3J3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC30.35■■■□□ 2.45
RGPD4Q7Z3J3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC30.35■■■□□ 2.45
RGPD4Q7Z3J3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC30.35■■■□□ 2.45
RGPD4Q7Z3J3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
RGPD4Q7Z3J3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms