Protein–RNA interactions for Protein: Q6ZMD2

SPNS3, Protein spinster homolog 3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3Q6ZMD2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SPNS3Q6ZMD2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.25■□□□□ 0.83
SPNS3Q6ZMD2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPNS3Q6ZMD2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.25■□□□□ 0.83
SPNS3Q6ZMD2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPNS3Q6ZMD2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPNS3Q6ZMD2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPNS3Q6ZMD2 WHAMMP3-201ENST00000611636 1609 ntBASIC20.24■□□□□ 0.83
SPNS3Q6ZMD2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.24■□□□□ 0.83
SPNS3Q6ZMD2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPNS3Q6ZMD2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPNS3Q6ZMD2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
SPNS3Q6ZMD2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.24■□□□□ 0.83
SPNS3Q6ZMD2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.24■□□□□ 0.83
SPNS3Q6ZMD2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.24■□□□□ 0.83
SPNS3Q6ZMD2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.24■□□□□ 0.83
SPNS3Q6ZMD2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SPNS3Q6ZMD2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPNS3Q6ZMD2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.23■□□□□ 0.83
SPNS3Q6ZMD2 EDA-201ENST00000338901 1233 ntBASIC20.23■□□□□ 0.83
SPNS3Q6ZMD2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPNS3Q6ZMD2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.23■□□□□ 0.83
SPNS3Q6ZMD2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPNS3Q6ZMD2 AC097381.1-201ENST00000429019 1296 ntBASIC20.23■□□□□ 0.83
SPNS3Q6ZMD2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.23■□□□□ 0.83
SPNS3Q6ZMD2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.23■□□□□ 0.83
SPNS3Q6ZMD2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPNS3Q6ZMD2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.23■□□□□ 0.83
SPNS3Q6ZMD2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SPNS3Q6ZMD2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPNS3Q6ZMD2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPNS3Q6ZMD2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.22■□□□□ 0.83
SPNS3Q6ZMD2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SPNS3Q6ZMD2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPNS3Q6ZMD2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPNS3Q6ZMD2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPNS3Q6ZMD2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPNS3Q6ZMD2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.21■□□□□ 0.83
SPNS3Q6ZMD2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPNS3Q6ZMD2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.21■□□□□ 0.83
SPNS3Q6ZMD2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.21■□□□□ 0.83
SPNS3Q6ZMD2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPNS3Q6ZMD2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.2■□□□□ 0.82
SPNS3Q6ZMD2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SPNS3Q6ZMD2 AL162430.1-201ENST00000480705 870 ntBASIC20.2■□□□□ 0.82
SPNS3Q6ZMD2 AL355001.2-201ENST00000620617 1191 ntBASIC20.2■□□□□ 0.82
SPNS3Q6ZMD2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.2■□□□□ 0.82
SPNS3Q6ZMD2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPNS3Q6ZMD2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPNS3Q6ZMD2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
SPNS3Q6ZMD2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPNS3Q6ZMD2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPNS3Q6ZMD2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPNS3Q6ZMD2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.19■□□□□ 0.82
SPNS3Q6ZMD2 MIR4281-201ENST00000580852 62 ntBASIC20.19■□□□□ 0.82
SPNS3Q6ZMD2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPNS3Q6ZMD2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPNS3Q6ZMD2 BX255925.1-201ENST00000566954 1854 ntBASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 UNC93B3-201ENST00000308076 687 ntBASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPNS3Q6ZMD2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPNS3Q6ZMD2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPNS3Q6ZMD2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SPNS3Q6ZMD2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.17■□□□□ 0.82
SPNS3Q6ZMD2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SPNS3Q6ZMD2 AC105265.2-201ENST00000467189 838 ntBASIC20.17■□□□□ 0.82
SPNS3Q6ZMD2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.17■□□□□ 0.82
SPNS3Q6ZMD2 AL136162.1-201ENST00000607711 1078 ntBASIC20.17■□□□□ 0.82
SPNS3Q6ZMD2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPNS3Q6ZMD2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPNS3Q6ZMD2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SPNS3Q6ZMD2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SPNS3Q6ZMD2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.16■□□□□ 0.82
SPNS3Q6ZMD2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
SPNS3Q6ZMD2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SPNS3Q6ZMD2 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.16■□□□□ 0.82
SPNS3Q6ZMD2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.16■□□□□ 0.82
SPNS3Q6ZMD2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPNS3Q6ZMD2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPNS3Q6ZMD2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPNS3Q6ZMD2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.15■□□□□ 0.82
SPNS3Q6ZMD2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.15■□□□□ 0.82
SPNS3Q6ZMD2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPNS3Q6ZMD2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
SPNS3Q6ZMD2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.15■□□□□ 0.82
SPNS3Q6ZMD2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPNS3Q6ZMD2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SPNS3Q6ZMD2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms