Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00575Q6W349 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LINC00575Q6W349 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
LINC00575Q6W349 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00575Q6W349 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
LINC00575Q6W349 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00575Q6W349 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00575Q6W349 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC00575Q6W349 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00575Q6W349 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LINC00575Q6W349 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00575Q6W349 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00575Q6W349 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC00575Q6W349 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00575Q6W349 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC00575Q6W349 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00575Q6W349 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00575Q6W349 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
LINC00575Q6W349 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00575Q6W349 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00575Q6W349 CIB2-204ENST00000557846 934 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC00575Q6W349 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC00575Q6W349 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00575Q6W349 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00575Q6W349 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00575Q6W349 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00575Q6W349 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00575Q6W349 HNRNPLP2-201ENST00000568980 1570 ntBASIC14.81□□□□□ -0.04
LINC00575Q6W349 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00575Q6W349 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC00575Q6W349 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LINC00575Q6W349 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC00575Q6W349 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00575Q6W349 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00575Q6W349 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00575Q6W349 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LINC00575Q6W349 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LINC00575Q6W349 GALC-202ENST00000393568 2054 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00575Q6W349 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00575Q6W349 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00575Q6W349 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC00575Q6W349 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00575Q6W349 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00575Q6W349 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00575Q6W349 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00575Q6W349 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00575Q6W349 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
LINC00575Q6W349 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00575Q6W349 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00575Q6W349 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LINC00575Q6W349 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00575Q6W349 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00575Q6W349 PKD1P6-201ENST00000343738 4769 ntBASIC14.79□□□□□ -0.04
LINC00575Q6W349 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LINC00575Q6W349 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00575Q6W349 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00575Q6W349 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LINC00575Q6W349 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
LINC00575Q6W349 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LINC00575Q6W349 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LINC00575Q6W349 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00575Q6W349 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00575Q6W349 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00575Q6W349 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00575Q6W349 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00575Q6W349 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00575Q6W349 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
LINC00575Q6W349 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00575Q6W349 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
LINC00575Q6W349 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00575Q6W349 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LINC00575Q6W349 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00575Q6W349 AC233723.2-201ENST00000623798 2106 ntBASIC14.77□□□□□ -0.04
LINC00575Q6W349 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00575Q6W349 SUZ12P1-203ENST00000578195 985 ntBASIC14.77□□□□□ -0.05
LINC00575Q6W349 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LINC00575Q6W349 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LINC00575Q6W349 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00575Q6W349 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00575Q6W349 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00575Q6W349 AL359504.2-201ENST00000605506 1601 ntBASIC14.77□□□□□ -0.05
LINC00575Q6W349 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00575Q6W349 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
LINC00575Q6W349 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00575Q6W349 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC14.76□□□□□ -0.05
LINC00575Q6W349 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00575Q6W349 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00575Q6W349 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00575Q6W349 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LINC00575Q6W349 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00575Q6W349 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00575Q6W349 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00575Q6W349 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00575Q6W349 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00575Q6W349 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC14.76□□□□□ -0.05
LINC00575Q6W349 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC00575Q6W349 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00575Q6W349 LINC00565-201ENST00000562710 2331 ntBASIC14.76□□□□□ -0.05
LINC00575Q6W349 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00575Q6W349 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms