Protein–RNA interactions for Protein: Q6PKG0

LARP1, La-related protein 1, humanhuman

Known RBP Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP1Q6PKG0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
LARP1Q6PKG0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.57■■■□□ 2.64
LARP1Q6PKG0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
LARP1Q6PKG0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.56■■■□□ 2.64
LARP1Q6PKG0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.56■■■□□ 2.64
LARP1Q6PKG0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
LARP1Q6PKG0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
LARP1Q6PKG0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
LARP1Q6PKG0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.55■■■□□ 2.64
LARP1Q6PKG0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC31.55■■■□□ 2.64
LARP1Q6PKG0 SNX5-217ENST00000606557 1087 ntBASIC31.55■■■□□ 2.64
LARP1Q6PKG0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
LARP1Q6PKG0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
LARP1Q6PKG0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
LARP1Q6PKG0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
LARP1Q6PKG0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.54■■■□□ 2.64
LARP1Q6PKG0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC31.54■■■□□ 2.64
LARP1Q6PKG0 AC024257.2-201ENST00000549699 147 ntBASIC31.54■■■□□ 2.64
LARP1Q6PKG0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
LARP1Q6PKG0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
LARP1Q6PKG0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
LARP1Q6PKG0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
LARP1Q6PKG0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
LARP1Q6PKG0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
LARP1Q6PKG0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
LARP1Q6PKG0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.52■■■□□ 2.64
LARP1Q6PKG0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
LARP1Q6PKG0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.64
LARP1Q6PKG0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
LARP1Q6PKG0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
LARP1Q6PKG0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
LARP1Q6PKG0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.5■■■□□ 2.63
LARP1Q6PKG0 MIR6722-201ENST00000617286 78 ntBASIC31.5■■■□□ 2.63
LARP1Q6PKG0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC31.5■■■□□ 2.63
LARP1Q6PKG0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.5■■■□□ 2.63
LARP1Q6PKG0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
LARP1Q6PKG0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
LARP1Q6PKG0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
LARP1Q6PKG0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.49■■■□□ 2.63
LARP1Q6PKG0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
LARP1Q6PKG0 EDA-201ENST00000338901 1233 ntBASIC31.49■■■□□ 2.63
LARP1Q6PKG0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
LARP1Q6PKG0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC31.49■■■□□ 2.63
LARP1Q6PKG0 AL355001.2-201ENST00000620617 1191 ntBASIC31.49■■■□□ 2.63
LARP1Q6PKG0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
LARP1Q6PKG0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
LARP1Q6PKG0 AC105265.2-201ENST00000467189 838 ntBASIC31.48■■■□□ 2.63
LARP1Q6PKG0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
LARP1Q6PKG0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
LARP1Q6PKG0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
LARP1Q6PKG0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC31.47■■■□□ 2.63
LARP1Q6PKG0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
LARP1Q6PKG0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
LARP1Q6PKG0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LARP1Q6PKG0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
LARP1Q6PKG0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC31.46■■■□□ 2.63
LARP1Q6PKG0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.46■■■□□ 2.63
LARP1Q6PKG0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
LARP1Q6PKG0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC31.45■■■□□ 2.63
LARP1Q6PKG0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.45■■■□□ 2.63
LARP1Q6PKG0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
LARP1Q6PKG0 AL136967.2-201ENST00000623968 743 ntBASIC31.45■■■□□ 2.63
LARP1Q6PKG0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.62
LARP1Q6PKG0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
LARP1Q6PKG0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC31.44■■■□□ 2.62
LARP1Q6PKG0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC31.44■■■□□ 2.62
LARP1Q6PKG0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
LARP1Q6PKG0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
LARP1Q6PKG0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
LARP1Q6PKG0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
LARP1Q6PKG0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
LARP1Q6PKG0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
LARP1Q6PKG0 FOXO3B-201ENST00000395675 1928 ntBASIC31.42■■■□□ 2.62
LARP1Q6PKG0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LARP1Q6PKG0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
LARP1Q6PKG0 SRD5A1P1-201ENST00000442297 786 ntBASIC31.42■■■□□ 2.62
LARP1Q6PKG0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.42■■■□□ 2.62
LARP1Q6PKG0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC31.42■■■□□ 2.62
LARP1Q6PKG0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
LARP1Q6PKG0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
LARP1Q6PKG0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
LARP1Q6PKG0 ANKRD20A6P-201ENST00000618763 204 ntBASIC31.41■■■□□ 2.62
LARP1Q6PKG0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
LARP1Q6PKG0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
LARP1Q6PKG0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
LARP1Q6PKG0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
LARP1Q6PKG0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
LARP1Q6PKG0 AF213884.3-201ENST00000563833 479 ntBASIC31.4■■■□□ 2.62
LARP1Q6PKG0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.4■■■□□ 2.62
LARP1Q6PKG0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
LARP1Q6PKG0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.4■■■□□ 2.62
LARP1Q6PKG0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
LARP1Q6PKG0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.39■■■□□ 2.62
LARP1Q6PKG0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
LARP1Q6PKG0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
LARP1Q6PKG0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
LARP1Q6PKG0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
LARP1Q6PKG0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31.38■■■□□ 2.61
LARP1Q6PKG0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC31.38■■■□□ 2.61
LARP1Q6PKG0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms