Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HLA-DQA1Q5Y7H0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
HLA-DQA1Q5Y7H0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.83■■□□□ 1.09
HLA-DQA1Q5Y7H0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HLA-DQA1Q5Y7H0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
HLA-DQA1Q5Y7H0 SLC6A10P-202ENST00000431994 2058 ntBASIC21.82■■□□□ 1.08
HLA-DQA1Q5Y7H0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
HLA-DQA1Q5Y7H0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQA1Q5Y7H0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQA1Q5Y7H0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
HLA-DQA1Q5Y7H0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQA1Q5Y7H0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQA1Q5Y7H0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQA1Q5Y7H0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.81■■□□□ 1.08
HLA-DQA1Q5Y7H0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQA1Q5Y7H0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQA1Q5Y7H0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQA1Q5Y7H0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQA1Q5Y7H0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 RARRES2P1-201ENST00000474487 481 ntBASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 AC103834.1-201ENST00000520383 144 ntBASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.8■■□□□ 1.08
HLA-DQA1Q5Y7H0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.79■■□□□ 1.08
HLA-DQA1Q5Y7H0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.79■■□□□ 1.08
HLA-DQA1Q5Y7H0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQA1Q5Y7H0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQA1Q5Y7H0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQA1Q5Y7H0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQA1Q5Y7H0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.79■■□□□ 1.08
HLA-DQA1Q5Y7H0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQA1Q5Y7H0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQA1Q5Y7H0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.79■■□□□ 1.08
HLA-DQA1Q5Y7H0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQA1Q5Y7H0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 THA1P-201ENST00000590384 1145 ntBASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.78■■□□□ 1.08
HLA-DQA1Q5Y7H0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DQA1Q5Y7H0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.77■■□□□ 1.08
HLA-DQA1Q5Y7H0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
HLA-DQA1Q5Y7H0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HLA-DQA1Q5Y7H0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HLA-DQA1Q5Y7H0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
HLA-DQA1Q5Y7H0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DQA1Q5Y7H0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.76■■□□□ 1.07
HLA-DQA1Q5Y7H0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DQA1Q5Y7H0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.76■■□□□ 1.07
HLA-DQA1Q5Y7H0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
HLA-DQA1Q5Y7H0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.76■■□□□ 1.07
HLA-DQA1Q5Y7H0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.76■■□□□ 1.07
HLA-DQA1Q5Y7H0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.76■■□□□ 1.07
HLA-DQA1Q5Y7H0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DQA1Q5Y7H0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
HLA-DQA1Q5Y7H0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 AL031848.2-201ENST00000607670 837 ntBASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 AC011551.1-201ENST00000614101 683 ntBASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 AC020928.2-201ENST00000588717 2197 ntBASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DQA1Q5Y7H0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.74■■□□□ 1.07
HLA-DQA1Q5Y7H0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DQA1Q5Y7H0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DQA1Q5Y7H0 KRT18P24-201ENST00000344739 1156 ntBASIC21.74■■□□□ 1.07
HLA-DQA1Q5Y7H0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DQA1Q5Y7H0 AC103724.3-201ENST00000564481 992 ntBASIC21.74■■□□□ 1.07
HLA-DQA1Q5Y7H0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DQA1Q5Y7H0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DQA1Q5Y7H0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DQA1Q5Y7H0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DQA1Q5Y7H0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DQA1Q5Y7H0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.73■■□□□ 1.07
HLA-DQA1Q5Y7H0 AC120024.1-201ENST00000562672 995 ntBASIC21.73■■□□□ 1.07
HLA-DQA1Q5Y7H0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
HLA-DQA1Q5Y7H0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms