Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01554Q52M75 KLF16-203ENST00000592313 508 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC01554Q52M75 WASH5P-204ENST00000632292 975 ntBASIC11.72□□□□□ -0.53
LINC01554Q52M75 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01554Q52M75 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01554Q52M75 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01554Q52M75 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01554Q52M75 MCC-208ENST00000514701 2855 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01554Q52M75 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01554Q52M75 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
LINC01554Q52M75 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LINC01554Q52M75 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01554Q52M75 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01554Q52M75 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC01554Q52M75 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01554Q52M75 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
LINC01554Q52M75 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01554Q52M75 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01554Q52M75 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01554Q52M75 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
LINC01554Q52M75 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LINC01554Q52M75 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01554Q52M75 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01554Q52M75 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01554Q52M75 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01554Q52M75 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01554Q52M75 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01554Q52M75 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01554Q52M75 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
LINC01554Q52M75 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LINC01554Q52M75 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LINC01554Q52M75 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01554Q52M75 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01554Q52M75 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LINC01554Q52M75 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01554Q52M75 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LINC01554Q52M75 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC01554Q52M75 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01554Q52M75 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01554Q52M75 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01554Q52M75 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LINC01554Q52M75 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01554Q52M75 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LINC01554Q52M75 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01554Q52M75 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC01554Q52M75 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01554Q52M75 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01554Q52M75 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01554Q52M75 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LINC01554Q52M75 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01554Q52M75 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01554Q52M75 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01554Q52M75 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC01554Q52M75 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01554Q52M75 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01554Q52M75 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01554Q52M75 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01554Q52M75 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01554Q52M75 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01554Q52M75 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
LINC01554Q52M75 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
LINC01554Q52M75 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
LINC01554Q52M75 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01554Q52M75 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LINC01554Q52M75 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01554Q52M75 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
LINC01554Q52M75 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01554Q52M75 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01554Q52M75 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01554Q52M75 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01554Q52M75 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LINC01554Q52M75 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LINC01554Q52M75 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01554Q52M75 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01554Q52M75 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01554Q52M75 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01554Q52M75 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01554Q52M75 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC01554Q52M75 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01554Q52M75 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01554Q52M75 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC01554Q52M75 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01554Q52M75 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01554Q52M75 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01554Q52M75 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01554Q52M75 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
LINC01554Q52M75 AC010864.1-201ENST00000609407 1511 ntBASIC11.66□□□□□ -0.54
LINC01554Q52M75 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
LINC01554Q52M75 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC01554Q52M75 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01554Q52M75 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms