Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ID1-201ENST00000376105 1233 ntBASIC32.47■■■□□ 2.79
COL16A1Q07092 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC32.47■■■□□ 2.79
COL16A1Q07092 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC32.47■■■□□ 2.79
COL16A1Q07092 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC32.47■■■□□ 2.79
COL16A1Q07092 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC32.47■■■□□ 2.79
COL16A1Q07092 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC32.46■■■□□ 2.79
COL16A1Q07092 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
COL16A1Q07092 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
COL16A1Q07092 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC32.46■■■□□ 2.79
COL16A1Q07092 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
COL16A1Q07092 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC32.45■■■□□ 2.79
COL16A1Q07092 DUX4L19-201ENST00000557448 1267 ntBASIC32.45■■■□□ 2.79
COL16A1Q07092 AC022517.1-201ENST00000592429 346 ntBASIC32.45■■■□□ 2.79
COL16A1Q07092 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC32.45■■■□□ 2.78
COL16A1Q07092 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC32.44■■■□□ 2.78
COL16A1Q07092 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC32.44■■■□□ 2.78
COL16A1Q07092 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
COL16A1Q07092 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
COL16A1Q07092 RHOF-204ENST00000537265 699 ntTSL 2 BASIC32.44■■■□□ 2.78
COL16A1Q07092 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC32.44■■■□□ 2.78
COL16A1Q07092 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC32.43■■■□□ 2.78
COL16A1Q07092 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
COL16A1Q07092 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC32.43■■■□□ 2.78
COL16A1Q07092 AC004448.1-201ENST00000458332 883 ntBASIC32.43■■■□□ 2.78
COL16A1Q07092 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC32.43■■■□□ 2.78
COL16A1Q07092 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
COL16A1Q07092 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
COL16A1Q07092 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
COL16A1Q07092 IRS3P-201ENST00000223076 1006 ntBASIC32.42■■■□□ 2.78
COL16A1Q07092 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
COL16A1Q07092 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC32.42■■■□□ 2.78
COL16A1Q07092 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC32.41■■■□□ 2.78
COL16A1Q07092 AC034268.1-201ENST00000441047 882 ntBASIC32.41■■■□□ 2.78
COL16A1Q07092 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
COL16A1Q07092 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC32.4■■■□□ 2.78
COL16A1Q07092 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
COL16A1Q07092 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
COL16A1Q07092 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC32.4■■■□□ 2.78
COL16A1Q07092 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
COL16A1Q07092 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
COL16A1Q07092 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
COL16A1Q07092 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC32.39■■■□□ 2.78
COL16A1Q07092 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
COL16A1Q07092 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.39■■■□□ 2.77
COL16A1Q07092 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL16A1Q07092 SSSCA1-AS1-201ENST00000567594 614 ntBASIC32.38■■■□□ 2.77
COL16A1Q07092 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC32.38■■■□□ 2.77
COL16A1Q07092 SP2-202ENST00000613139 908 ntTSL 5 BASIC32.38■■■□□ 2.77
COL16A1Q07092 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
COL16A1Q07092 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC32.37■■■□□ 2.77
COL16A1Q07092 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.37■■■□□ 2.77
COL16A1Q07092 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC32.37■■■□□ 2.77
COL16A1Q07092 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
COL16A1Q07092 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC32.37■■■□□ 2.77
COL16A1Q07092 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
COL16A1Q07092 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC32.36■■■□□ 2.77
COL16A1Q07092 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
COL16A1Q07092 AL031602.1-201ENST00000633169 911 ntBASIC32.36■■■□□ 2.77
COL16A1Q07092 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC32.35■■■□□ 2.77
COL16A1Q07092 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
COL16A1Q07092 SLC47A1P1-202ENST00000449666 945 ntBASIC32.35■■■□□ 2.77
COL16A1Q07092 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC32.35■■■□□ 2.77
COL16A1Q07092 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC32.35■■■□□ 2.77
COL16A1Q07092 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
COL16A1Q07092 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
COL16A1Q07092 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC32.34■■■□□ 2.77
COL16A1Q07092 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC32.34■■■□□ 2.77
COL16A1Q07092 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC32.34■■■□□ 2.77
COL16A1Q07092 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
COL16A1Q07092 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
COL16A1Q07092 BX255925.1-201ENST00000566954 1854 ntBASIC32.32■■■□□ 2.76
COL16A1Q07092 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC32.32■■■□□ 2.76
COL16A1Q07092 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
COL16A1Q07092 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.31■■■□□ 2.76
COL16A1Q07092 PROC-203ENST00000409048 1586 ntTSL 5 BASIC32.31■■■□□ 2.76
COL16A1Q07092 SERBP1P1-201ENST00000396021 1160 ntBASIC32.31■■■□□ 2.76
COL16A1Q07092 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
COL16A1Q07092 AC099791.1-201ENST00000416440 715 ntBASIC32.3■■■□□ 2.76
COL16A1Q07092 PTCHD3P2-201ENST00000424937 1205 ntBASIC32.3■■■□□ 2.76
COL16A1Q07092 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
COL16A1Q07092 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC32.3■■■□□ 2.76
COL16A1Q07092 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
COL16A1Q07092 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC32.3■■■□□ 2.76
COL16A1Q07092 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC32.3■■■□□ 2.76
COL16A1Q07092 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
COL16A1Q07092 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
COL16A1Q07092 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
COL16A1Q07092 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
COL16A1Q07092 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
COL16A1Q07092 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC32.29■■■□□ 2.76
COL16A1Q07092 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
COL16A1Q07092 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
COL16A1Q07092 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC32.29■■■□□ 2.76
COL16A1Q07092 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
COL16A1Q07092 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC32.29■■■□□ 2.76
COL16A1Q07092 SYT6-210ENST00000641643 1587 ntBASIC32.29■■■□□ 2.76
COL16A1Q07092 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC32.28■■■□□ 2.76
COL16A1Q07092 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
COL16A1Q07092 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
COL16A1Q07092 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.28■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms