Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CLDN18P56856 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN18P56856 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.08■□□□□ 0.97
CLDN18P56856 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN18P56856 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.08■□□□□ 0.97
CLDN18P56856 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN18P56856 AC090877.2-201ENST00000558441 1738 ntBASIC21.08■□□□□ 0.97
CLDN18P56856 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CLDN18P56856 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLDN18P56856 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.07■□□□□ 0.96
CLDN18P56856 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.07■□□□□ 0.96
CLDN18P56856 KRT125P-201ENST00000546827 989 ntBASIC21.07■□□□□ 0.96
CLDN18P56856 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN18P56856 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN18P56856 SLC6A10P-202ENST00000431994 2058 ntBASIC21.06■□□□□ 0.96
CLDN18P56856 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CLDN18P56856 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN18P56856 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN18P56856 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.06■□□□□ 0.96
CLDN18P56856 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.05■□□□□ 0.96
CLDN18P56856 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.05■□□□□ 0.96
CLDN18P56856 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN18P56856 AC021242.3-201ENST00000607598 1377 ntBASIC21.05■□□□□ 0.96
CLDN18P56856 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN18P56856 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN18P56856 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN18P56856 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN18P56856 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN18P56856 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.04■□□□□ 0.96
CLDN18P56856 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.04■□□□□ 0.96
CLDN18P56856 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.04■□□□□ 0.96
CLDN18P56856 MIR4787-201ENST00000607364 84 ntBASIC21.04■□□□□ 0.96
CLDN18P56856 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLDN18P56856 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN18P56856 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLDN18P56856 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN18P56856 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN18P56856 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
CLDN18P56856 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN18P56856 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDN18P56856 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDN18P56856 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN18P56856 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN18P56856 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN18P56856 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN18P56856 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CLDN18P56856 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN18P56856 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN18P56856 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.02■□□□□ 0.96
CLDN18P56856 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.02■□□□□ 0.95
CLDN18P56856 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLDN18P56856 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDN18P56856 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CLDN18P56856 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN18P56856 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.01■□□□□ 0.95
CLDN18P56856 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.01■□□□□ 0.95
CLDN18P56856 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN18P56856 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDN18P56856 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN18P56856 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21■□□□□ 0.95
CLDN18P56856 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN18P56856 AF131216.4-201ENST00000638924 1588 ntBASIC21■□□□□ 0.95
CLDN18P56856 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN18P56856 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN18P56856 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.99■□□□□ 0.95
CLDN18P56856 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.99■□□□□ 0.95
CLDN18P56856 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.99■□□□□ 0.95
CLDN18P56856 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN18P56856 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN18P56856 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.99■□□□□ 0.95
CLDN18P56856 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.99■□□□□ 0.95
CLDN18P56856 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN18P56856 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.98■□□□□ 0.95
CLDN18P56856 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLDN18P56856 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN18P56856 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.98■□□□□ 0.95
CLDN18P56856 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN18P56856 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.98■□□□□ 0.95
CLDN18P56856 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN18P56856 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN18P56856 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN18P56856 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN18P56856 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN18P56856 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN18P56856 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CLDN18P56856 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN18P56856 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
CLDN18P56856 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN18P56856 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN18P56856 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN18P56856 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN18P56856 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN18P56856 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN18P56856 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.96■□□□□ 0.95
CLDN18P56856 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.96■□□□□ 0.95
CLDN18P56856 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CLDN18P56856 AL356441.2-201ENST00000443009 864 ntBASIC20.96■□□□□ 0.95
CLDN18P56856 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN18P56856 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN18P56856 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms