Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.58■■□□□ 1.85
CLCN1P35523 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CLCN1P35523 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.58■■□□□ 1.85
CLCN1P35523 MIR3648-2-201ENST00000581792 180 ntBASIC26.58■■□□□ 1.85
CLCN1P35523 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CLCN1P35523 MIR3648-1-201ENST00000615959 180 ntBASIC26.58■■□□□ 1.85
CLCN1P35523 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
CLCN1P35523 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
CLCN1P35523 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.57■■□□□ 1.84
CLCN1P35523 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLCN1P35523 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.57■■□□□ 1.84
CLCN1P35523 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.57■■□□□ 1.84
CLCN1P35523 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.57■■□□□ 1.84
CLCN1P35523 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLCN1P35523 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CLCN1P35523 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC26.57■■□□□ 1.84
CLCN1P35523 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC26.56■■□□□ 1.84
CLCN1P35523 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CLCN1P35523 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CLCN1P35523 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.56■■□□□ 1.84
CLCN1P35523 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
CLCN1P35523 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CLCN1P35523 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CLCN1P35523 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.55■■□□□ 1.84
CLCN1P35523 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.55■■□□□ 1.84
CLCN1P35523 MIR219A2-201ENST00000608502 1504 ntBASIC26.55■■□□□ 1.84
CLCN1P35523 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN1P35523 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN1P35523 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN1P35523 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN1P35523 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN1P35523 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CLCN1P35523 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.55■■□□□ 1.84
CLCN1P35523 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN1P35523 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.55■■□□□ 1.84
CLCN1P35523 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CLCN1P35523 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN1P35523 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN1P35523 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLCN1P35523 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLCN1P35523 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CLCN1P35523 AC148477.6-201ENST00000623746 465 ntBASIC26.54■■□□□ 1.84
CLCN1P35523 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLCN1P35523 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLCN1P35523 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLCN1P35523 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLCN1P35523 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLCN1P35523 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLCN1P35523 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CLCN1P35523 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.53■■□□□ 1.84
CLCN1P35523 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.53■■□□□ 1.84
CLCN1P35523 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CLCN1P35523 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.53■■□□□ 1.84
CLCN1P35523 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CLCN1P35523 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLCN1P35523 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLCN1P35523 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CLCN1P35523 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
CLCN1P35523 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CLCN1P35523 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CLCN1P35523 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CLCN1P35523 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CLCN1P35523 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.52■■□□□ 1.84
CLCN1P35523 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CLCN1P35523 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC26.52■■□□□ 1.84
CLCN1P35523 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.52■■□□□ 1.84
CLCN1P35523 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CLCN1P35523 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CLCN1P35523 AP003733.4-201ENST00000623785 1697 ntBASIC26.51■■□□□ 1.83
CLCN1P35523 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
CLCN1P35523 ABCB10P4-201ENST00000566803 2184 ntBASIC26.51■■□□□ 1.83
CLCN1P35523 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLCN1P35523 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CLCN1P35523 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
CLCN1P35523 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLCN1P35523 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.5■■□□□ 1.83
CLCN1P35523 AC016575.1-201ENST00000607026 382 ntBASIC26.5■■□□□ 1.83
CLCN1P35523 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC26.5■■□□□ 1.83
CLCN1P35523 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.5■■□□□ 1.83
CLCN1P35523 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CLCN1P35523 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.49■■□□□ 1.83
CLCN1P35523 MIR7108-201ENST00000614319 87 ntBASIC26.49■■□□□ 1.83
CLCN1P35523 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.49■■□□□ 1.83
CLCN1P35523 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLCN1P35523 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CLCN1P35523 AC137767.1-201ENST00000602918 1920 ntBASIC26.48■■□□□ 1.83
CLCN1P35523 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
CLCN1P35523 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CLCN1P35523 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CLCN1P35523 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CLCN1P35523 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CLCN1P35523 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CLCN1P35523 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLCN1P35523 AC233723.2-201ENST00000623798 2106 ntBASIC26.47■■□□□ 1.83
CLCN1P35523 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLCN1P35523 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.47■■□□□ 1.83
CLCN1P35523 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
CLCN1P35523 AL121603.2-201ENST00000557373 2117 ntBASIC26.46■■□□□ 1.83
CLCN1P35523 AC007375.3-201ENST00000600936 2314 ntBASIC26.46■■□□□ 1.83
CLCN1P35523 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms