Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ALDH1A1P00352 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC27.29■■□□□ 1.96
ALDH1A1P00352 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
ALDH1A1P00352 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.28■■□□□ 1.96
ALDH1A1P00352 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.28■■□□□ 1.96
ALDH1A1P00352 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ALDH1A1P00352 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
ALDH1A1P00352 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
ALDH1A1P00352 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ALDH1A1P00352 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ALDH1A1P00352 STOX2-205ENST00000513034 807 ntTSL 3 BASIC27.27■■□□□ 1.96
ALDH1A1P00352 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ALDH1A1P00352 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.27■■□□□ 1.96
ALDH1A1P00352 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ALDH1A1P00352 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ALDH1A1P00352 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
ALDH1A1P00352 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ALDH1A1P00352 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
ALDH1A1P00352 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC27.26■■□□□ 1.95
ALDH1A1P00352 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC27.26■■□□□ 1.95
ALDH1A1P00352 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ALDH1A1P00352 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
ALDH1A1P00352 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ALDH1A1P00352 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ALDH1A1P00352 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC27.25■■□□□ 1.95
ALDH1A1P00352 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.25■■□□□ 1.95
ALDH1A1P00352 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.25■■□□□ 1.95
ALDH1A1P00352 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.25■■□□□ 1.95
ALDH1A1P00352 AC092171.4-201ENST00000609130 632 ntBASIC27.24■■□□□ 1.95
ALDH1A1P00352 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
ALDH1A1P00352 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ALDH1A1P00352 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
ALDH1A1P00352 RASA4CP-201ENST00000424092 1398 ntBASIC27.22■■□□□ 1.95
ALDH1A1P00352 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
ALDH1A1P00352 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ALDH1A1P00352 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.22■■□□□ 1.95
ALDH1A1P00352 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ALDH1A1P00352 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
ALDH1A1P00352 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ALDH1A1P00352 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ALDH1A1P00352 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ALDH1A1P00352 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ALDH1A1P00352 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ALDH1A1P00352 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
ALDH1A1P00352 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
ALDH1A1P00352 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ALDH1A1P00352 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ALDH1A1P00352 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
ALDH1A1P00352 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
ALDH1A1P00352 CA15P2-201ENST00000611168 834 ntBASIC27.2■■□□□ 1.94
ALDH1A1P00352 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ALDH1A1P00352 SYT6-210ENST00000641643 1587 ntBASIC27.19■■□□□ 1.94
ALDH1A1P00352 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
ALDH1A1P00352 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
ALDH1A1P00352 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ALDH1A1P00352 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.18■■□□□ 1.94
ALDH1A1P00352 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ALDH1A1P00352 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.18■■□□□ 1.94
ALDH1A1P00352 DRD5P2-201ENST00000421395 2012 ntBASIC27.17■■□□□ 1.94
ALDH1A1P00352 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.17■■□□□ 1.94
ALDH1A1P00352 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC27.17■■□□□ 1.94
ALDH1A1P00352 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
ALDH1A1P00352 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ALDH1A1P00352 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ALDH1A1P00352 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.17■■□□□ 1.94
ALDH1A1P00352 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
ALDH1A1P00352 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
ALDH1A1P00352 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC27.16■■□□□ 1.94
ALDH1A1P00352 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.16■■□□□ 1.94
ALDH1A1P00352 MIR4767-201ENST00000582827 78 ntBASIC27.16■■□□□ 1.94
ALDH1A1P00352 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC27.16■■□□□ 1.94
ALDH1A1P00352 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ALDH1A1P00352 LINC01003-201ENST00000564834 1764 ntBASIC27.16■■□□□ 1.94
ALDH1A1P00352 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
ALDH1A1P00352 FOXO3B-201ENST00000395675 1928 ntBASIC27.16■■□□□ 1.94
ALDH1A1P00352 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
ALDH1A1P00352 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ALDH1A1P00352 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ALDH1A1P00352 IRS3P-201ENST00000223076 1006 ntBASIC27.15■■□□□ 1.94
ALDH1A1P00352 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ALDH1A1P00352 LBH-205ENST00000407930 756 ntTSL 2 BASIC27.15■■□□□ 1.94
ALDH1A1P00352 AC027682.1-201ENST00000562846 899 ntBASIC27.15■■□□□ 1.94
ALDH1A1P00352 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.15■■□□□ 1.94
ALDH1A1P00352 RARRES2P11-201ENST00000635158 484 ntBASIC27.15■■□□□ 1.94
ALDH1A1P00352 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ALDH1A1P00352 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
ALDH1A1P00352 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
ALDH1A1P00352 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
ALDH1A1P00352 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC27.14■■□□□ 1.94
ALDH1A1P00352 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27.14■■□□□ 1.94
ALDH1A1P00352 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
ALDH1A1P00352 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
ALDH1A1P00352 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.13■■□□□ 1.93
ALDH1A1P00352 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.13■■□□□ 1.93
ALDH1A1P00352 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ALDH1A1P00352 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
ALDH1A1P00352 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
ALDH1A1P00352 AC090192.1-201ENST00000517740 490 ntBASIC27.13■■□□□ 1.93
ALDH1A1P00352 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC27.13■■□□□ 1.93
ALDH1A1P00352 MAG-206ENST00000597035 542 ntTSL 4 BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms