Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ALX3O95076 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALX3O95076 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALX3O95076 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALX3O95076 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ALX3O95076 AC016575.1-201ENST00000607026 382 ntBASIC20.57■□□□□ 0.88
ALX3O95076 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALX3O95076 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALX3O95076 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ALX3O95076 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.56■□□□□ 0.88
ALX3O95076 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ALX3O95076 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
ALX3O95076 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALX3O95076 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.56■□□□□ 0.88
ALX3O95076 AC025884.2-201ENST00000553429 711 ntBASIC20.56■□□□□ 0.88
ALX3O95076 MIR4449-201ENST00000578365 66 ntBASIC20.56■□□□□ 0.88
ALX3O95076 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALX3O95076 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALX3O95076 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALX3O95076 AL121603.2-201ENST00000557373 2117 ntBASIC20.56■□□□□ 0.88
ALX3O95076 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALX3O95076 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.56■□□□□ 0.88
ALX3O95076 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALX3O95076 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.55■□□□□ 0.88
ALX3O95076 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.55■□□□□ 0.88
ALX3O95076 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ALX3O95076 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ALX3O95076 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALX3O95076 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ALX3O95076 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALX3O95076 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALX3O95076 AP003733.4-201ENST00000623785 1697 ntBASIC20.54■□□□□ 0.88
ALX3O95076 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALX3O95076 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALX3O95076 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALX3O95076 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALX3O95076 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ALX3O95076 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALX3O95076 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALX3O95076 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
ALX3O95076 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALX3O95076 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALX3O95076 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALX3O95076 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.53■□□□□ 0.88
ALX3O95076 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
ALX3O95076 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALX3O95076 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALX3O95076 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALX3O95076 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.53■□□□□ 0.88
ALX3O95076 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALX3O95076 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.53■□□□□ 0.88
ALX3O95076 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALX3O95076 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALX3O95076 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.52■□□□□ 0.88
ALX3O95076 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ALX3O95076 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.51■□□□□ 0.87
ALX3O95076 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALX3O95076 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.51■□□□□ 0.87
ALX3O95076 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
ALX3O95076 AL157400.5-201ENST00000507624 621 ntBASIC20.51■□□□□ 0.87
ALX3O95076 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALX3O95076 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALX3O95076 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ALX3O95076 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ALX3O95076 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
ALX3O95076 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.5■□□□□ 0.87
ALX3O95076 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALX3O95076 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALX3O95076 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.5■□□□□ 0.87
ALX3O95076 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ALX3O95076 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ALX3O95076 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALX3O95076 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALX3O95076 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.5■□□□□ 0.87
ALX3O95076 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ALX3O95076 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALX3O95076 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ALX3O95076 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.5■□□□□ 0.87
ALX3O95076 MIR3960-201ENST00000583311 91 ntBASIC20.5■□□□□ 0.87
ALX3O95076 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ALX3O95076 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ALX3O95076 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALX3O95076 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
ALX3O95076 C9orf163-202ENST00000624034 2573 ntBASIC20.49■□□□□ 0.87
ALX3O95076 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALX3O95076 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALX3O95076 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALX3O95076 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ALX3O95076 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALX3O95076 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALX3O95076 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.49■□□□□ 0.87
ALX3O95076 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.49■□□□□ 0.87
ALX3O95076 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALX3O95076 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALX3O95076 SLC6A10P-202ENST00000431994 2058 ntBASIC20.49■□□□□ 0.87
ALX3O95076 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.49■□□□□ 0.87
ALX3O95076 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALX3O95076 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALX3O95076 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.48■□□□□ 0.87
ALX3O95076 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms