Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPNE3O75131 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPNE3O75131 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.44■■□□□ 1.18
CPNE3O75131 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPNE3O75131 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPNE3O75131 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.44■■□□□ 1.18
CPNE3O75131 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE3O75131 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE3O75131 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CPNE3O75131 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE3O75131 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.43■■□□□ 1.18
CPNE3O75131 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE3O75131 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE3O75131 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE3O75131 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.43■■□□□ 1.18
CPNE3O75131 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.43■■□□□ 1.18
CPNE3O75131 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.43■■□□□ 1.18
CPNE3O75131 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.43■■□□□ 1.18
CPNE3O75131 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.42■■□□□ 1.18
CPNE3O75131 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.42■■□□□ 1.18
CPNE3O75131 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CPNE3O75131 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CPNE3O75131 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.41■■□□□ 1.18
CPNE3O75131 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CPNE3O75131 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CPNE3O75131 UNC93B8-201ENST00000511903 705 ntBASIC22.41■■□□□ 1.18
CPNE3O75131 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.41■■□□□ 1.18
CPNE3O75131 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.41■■□□□ 1.18
CPNE3O75131 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPNE3O75131 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPNE3O75131 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
CPNE3O75131 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CPNE3O75131 KRT16P3-201ENST00000439127 1283 ntBASIC22.4■■□□□ 1.18
CPNE3O75131 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.4■■□□□ 1.18
CPNE3O75131 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.4■■□□□ 1.18
CPNE3O75131 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPNE3O75131 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPNE3O75131 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CPNE3O75131 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
CPNE3O75131 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.39■■□□□ 1.17
CPNE3O75131 TSPY9P-201ENST00000440215 945 ntBASIC22.39■■□□□ 1.17
CPNE3O75131 TSPY11P-201ENST00000442607 1045 ntBASIC22.39■■□□□ 1.17
CPNE3O75131 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CPNE3O75131 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.39■■□□□ 1.17
CPNE3O75131 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CPNE3O75131 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.39■■□□□ 1.17
CPNE3O75131 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.38■■□□□ 1.17
CPNE3O75131 FOXO3B-201ENST00000395675 1928 ntBASIC22.38■■□□□ 1.17
CPNE3O75131 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.38■■□□□ 1.17
CPNE3O75131 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE3O75131 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE3O75131 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE3O75131 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.37■■□□□ 1.17
CPNE3O75131 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.37■■□□□ 1.17
CPNE3O75131 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
CPNE3O75131 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.37■■□□□ 1.17
CPNE3O75131 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.37■■□□□ 1.17
CPNE3O75131 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE3O75131 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE3O75131 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE3O75131 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE3O75131 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE3O75131 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.36■■□□□ 1.17
CPNE3O75131 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.36■■□□□ 1.17
CPNE3O75131 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE3O75131 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.35■■□□□ 1.17
CPNE3O75131 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE3O75131 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE3O75131 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE3O75131 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE3O75131 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.35■■□□□ 1.17
CPNE3O75131 AC092028.1-203ENST00000608262 953 ntBASIC22.35■■□□□ 1.17
CPNE3O75131 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE3O75131 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.35■■□□□ 1.17
CPNE3O75131 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE3O75131 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE3O75131 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE3O75131 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE3O75131 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE3O75131 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.34■■□□□ 1.17
CPNE3O75131 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CPNE3O75131 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE3O75131 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE3O75131 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPNE3O75131 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.33■■□□□ 1.17
CPNE3O75131 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CPNE3O75131 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.33■■□□□ 1.17
CPNE3O75131 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPNE3O75131 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.33■■□□□ 1.16
CPNE3O75131 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CPNE3O75131 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CPNE3O75131 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.32■■□□□ 1.16
CPNE3O75131 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CPNE3O75131 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.32■■□□□ 1.16
CPNE3O75131 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.32■■□□□ 1.16
CPNE3O75131 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CPNE3O75131 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPNE3O75131 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
CPNE3O75131 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.32■■□□□ 1.16
CPNE3O75131 AC096887.2-201ENST00000623443 1957 ntBASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms