Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 C9orf163-202ENST00000624034 2573 ntBASIC19.04■□□□□ 0.64
SSSCA1O60232 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.04■□□□□ 0.64
SSSCA1O60232 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSSCA1O60232 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SSSCA1O60232 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSSCA1O60232 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSSCA1O60232 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.04■□□□□ 0.64
SSSCA1O60232 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.04■□□□□ 0.64
SSSCA1O60232 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSSCA1O60232 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSSCA1O60232 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSSCA1O60232 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.04■□□□□ 0.64
SSSCA1O60232 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSSCA1O60232 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSSCA1O60232 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSSCA1O60232 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSSCA1O60232 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSSCA1O60232 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SSSCA1O60232 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSSCA1O60232 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SSSCA1O60232 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSSCA1O60232 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSSCA1O60232 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSSCA1O60232 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSSCA1O60232 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSSCA1O60232 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSSCA1O60232 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSSCA1O60232 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSSCA1O60232 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.02■□□□□ 0.64
SSSCA1O60232 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.02■□□□□ 0.64
SSSCA1O60232 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSSCA1O60232 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSSCA1O60232 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SSSCA1O60232 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSSCA1O60232 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSSCA1O60232 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSSCA1O60232 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.02■□□□□ 0.63
SSSCA1O60232 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.01■□□□□ 0.63
SSSCA1O60232 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.01■□□□□ 0.63
SSSCA1O60232 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SSSCA1O60232 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.01■□□□□ 0.63
SSSCA1O60232 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSSCA1O60232 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSSCA1O60232 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSSCA1O60232 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSSCA1O60232 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SSSCA1O60232 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSSCA1O60232 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSSCA1O60232 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSSCA1O60232 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
SSSCA1O60232 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSSCA1O60232 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19■□□□□ 0.63
SSSCA1O60232 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSSCA1O60232 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19■□□□□ 0.63
SSSCA1O60232 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSSCA1O60232 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SSSCA1O60232 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSSCA1O60232 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSSCA1O60232 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSSCA1O60232 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSSCA1O60232 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSSCA1O60232 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSSCA1O60232 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.99■□□□□ 0.63
SSSCA1O60232 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.99■□□□□ 0.63
SSSCA1O60232 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSSCA1O60232 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.99■□□□□ 0.63
SSSCA1O60232 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSSCA1O60232 LINC01971-201ENST00000617888 1048 ntBASIC18.98■□□□□ 0.63
SSSCA1O60232 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SSSCA1O60232 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.98■□□□□ 0.63
SSSCA1O60232 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
SSSCA1O60232 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSSCA1O60232 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.98■□□□□ 0.63
SSSCA1O60232 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSSCA1O60232 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSSCA1O60232 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSSCA1O60232 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSSCA1O60232 CLDN5-201ENST00000403084 2357 ntBASIC18.97■□□□□ 0.63
SSSCA1O60232 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.97■□□□□ 0.63
SSSCA1O60232 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSSCA1O60232 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSSCA1O60232 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSSCA1O60232 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSSCA1O60232 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.96■□□□□ 0.63
SSSCA1O60232 DUX4L13-201ENST00000554103 1267 ntBASIC18.96■□□□□ 0.63
SSSCA1O60232 DUX4L15-201ENST00000611059 1267 ntBASIC18.96■□□□□ 0.63
SSSCA1O60232 DUX4L23-201ENST00000615195 1269 ntBASIC18.96■□□□□ 0.63
SSSCA1O60232 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSSCA1O60232 DUX4L24-201ENST00000617576 1269 ntBASIC18.96■□□□□ 0.63
SSSCA1O60232 DUX4L22-201ENST00000618238 1269 ntBASIC18.96■□□□□ 0.63
SSSCA1O60232 DUX4L20-201ENST00000619712 1269 ntBASIC18.96■□□□□ 0.63
SSSCA1O60232 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSSCA1O60232 DUX4L21-201ENST00000622058 1269 ntBASIC18.96■□□□□ 0.63
SSSCA1O60232 DUX4L10-201ENST00000622460 1267 ntBASIC18.96■□□□□ 0.63
SSSCA1O60232 DUX4L25-201ENST00000624915 1269 ntBASIC18.96■□□□□ 0.63
SSSCA1O60232 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSSCA1O60232 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.96■□□□□ 0.63
SSSCA1O60232 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.96■□□□□ 0.63
SSSCA1O60232 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSSCA1O60232 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms