Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXS1O43638 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
FOXS1O43638 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.23■■□□□ 1.15
FOXS1O43638 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
FOXS1O43638 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
FOXS1O43638 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FOXS1O43638 AC090877.2-201ENST00000558441 1738 ntBASIC22.23■■□□□ 1.15
FOXS1O43638 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.23■■□□□ 1.15
FOXS1O43638 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXS1O43638 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.22■■□□□ 1.15
FOXS1O43638 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXS1O43638 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.22■■□□□ 1.15
FOXS1O43638 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.22■■□□□ 1.15
FOXS1O43638 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
FOXS1O43638 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.22■■□□□ 1.15
FOXS1O43638 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
FOXS1O43638 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXS1O43638 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXS1O43638 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXS1O43638 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
FOXS1O43638 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
FOXS1O43638 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
FOXS1O43638 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.15
FOXS1O43638 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
FOXS1O43638 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
FOXS1O43638 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.2■■□□□ 1.14
FOXS1O43638 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXS1O43638 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXS1O43638 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
FOXS1O43638 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
FOXS1O43638 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
FOXS1O43638 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
FOXS1O43638 AC137630.3-201ENST00000607245 391 ntBASIC22.19■■□□□ 1.14
FOXS1O43638 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
FOXS1O43638 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.19■■□□□ 1.14
FOXS1O43638 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXS1O43638 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXS1O43638 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXS1O43638 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
FOXS1O43638 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXS1O43638 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXS1O43638 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.18■■□□□ 1.14
FOXS1O43638 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXS1O43638 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXS1O43638 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXS1O43638 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.17■■□□□ 1.14
FOXS1O43638 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXS1O43638 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXS1O43638 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXS1O43638 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXS1O43638 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
FOXS1O43638 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
FOXS1O43638 AC239859.2-201ENST00000444165 318 ntBASIC22.17■■□□□ 1.14
FOXS1O43638 Z92544.1-202ENST00000571933 1220 ntBASIC22.17■■□□□ 1.14
FOXS1O43638 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXS1O43638 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
FOXS1O43638 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXS1O43638 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXS1O43638 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXS1O43638 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXS1O43638 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
FOXS1O43638 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXS1O43638 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.16■■□□□ 1.14
FOXS1O43638 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
FOXS1O43638 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.16■■□□□ 1.14
FOXS1O43638 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.16■■□□□ 1.14
FOXS1O43638 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.16■■□□□ 1.14
FOXS1O43638 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
FOXS1O43638 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
FOXS1O43638 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.15■■□□□ 1.14
FOXS1O43638 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXS1O43638 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.15■■□□□ 1.14
FOXS1O43638 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.15■■□□□ 1.14
FOXS1O43638 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
FOXS1O43638 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXS1O43638 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXS1O43638 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
FOXS1O43638 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
FOXS1O43638 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
FOXS1O43638 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
FOXS1O43638 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
FOXS1O43638 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.14■■□□□ 1.13
FOXS1O43638 BX664725.1-201ENST00000438252 379 ntBASIC22.14■■□□□ 1.13
FOXS1O43638 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.14■■□□□ 1.13
FOXS1O43638 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
FOXS1O43638 MIR6089-201ENST00000616698 64 ntBASIC22.14■■□□□ 1.13
FOXS1O43638 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
FOXS1O43638 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXS1O43638 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.13■■□□□ 1.13
FOXS1O43638 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXS1O43638 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXS1O43638 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXS1O43638 AF131216.4-201ENST00000638924 1588 ntBASIC22.12■■□□□ 1.13
FOXS1O43638 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXS1O43638 GUSBP5-201ENST00000418136 578 ntBASIC22.12■■□□□ 1.13
FOXS1O43638 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.12■■□□□ 1.13
FOXS1O43638 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.12■■□□□ 1.13
FOXS1O43638 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
FOXS1O43638 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
FOXS1O43638 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms