Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV21A0A0B4J279 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV21A0A0B4J279 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV21A0A0B4J279 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV21A0A0B4J279 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV21A0A0B4J279 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.38■□□□□ 0.37
TRAV21A0A0B4J279 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV21A0A0B4J279 MIR6089-201ENST00000616698 64 ntBASIC17.38■□□□□ 0.37
TRAV21A0A0B4J279 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV21A0A0B4J279 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV21A0A0B4J279 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV21A0A0B4J279 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAV21A0A0B4J279 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV21A0A0B4J279 AC092296.2-201ENST00000589470 999 ntBASIC17.37■□□□□ 0.37
TRAV21A0A0B4J279 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV21A0A0B4J279 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV21A0A0B4J279 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV21A0A0B4J279 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV21A0A0B4J279 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV21A0A0B4J279 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV21A0A0B4J279 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV21A0A0B4J279 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV21A0A0B4J279 RP9P-202ENST00000450133 1212 ntBASIC17.36■□□□□ 0.37
TRAV21A0A0B4J279 ECEL1P2-201ENST00000461596 1295 ntBASIC17.36■□□□□ 0.37
TRAV21A0A0B4J279 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV21A0A0B4J279 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV21A0A0B4J279 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV21A0A0B4J279 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV21A0A0B4J279 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV21A0A0B4J279 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV21A0A0B4J279 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRAV21A0A0B4J279 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV21A0A0B4J279 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV21A0A0B4J279 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV21A0A0B4J279 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.34■□□□□ 0.37
TRAV21A0A0B4J279 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRAV21A0A0B4J279 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV21A0A0B4J279 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV21A0A0B4J279 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV21A0A0B4J279 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRAV21A0A0B4J279 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRAV21A0A0B4J279 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.33■□□□□ 0.37
TRAV21A0A0B4J279 KRT18P10-201ENST00000388836 1287 ntBASIC17.33■□□□□ 0.36
TRAV21A0A0B4J279 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV21A0A0B4J279 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV21A0A0B4J279 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV21A0A0B4J279 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV21A0A0B4J279 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV21A0A0B4J279 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV21A0A0B4J279 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV21A0A0B4J279 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV21A0A0B4J279 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV21A0A0B4J279 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV21A0A0B4J279 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV21A0A0B4J279 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV21A0A0B4J279 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV21A0A0B4J279 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV21A0A0B4J279 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV21A0A0B4J279 AC093536.1-201ENST00000569153 554 ntBASIC17.31■□□□□ 0.36
TRAV21A0A0B4J279 AC022413.1-201ENST00000624602 984 ntBASIC17.31■□□□□ 0.36
TRAV21A0A0B4J279 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV21A0A0B4J279 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRAV21A0A0B4J279 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV21A0A0B4J279 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV21A0A0B4J279 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 MIR7108-201ENST00000614319 87 ntBASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV21A0A0B4J279 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV21A0A0B4J279 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV21A0A0B4J279 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV21A0A0B4J279 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRAV21A0A0B4J279 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV21A0A0B4J279 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV21A0A0B4J279 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV21A0A0B4J279 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 1482.7 ms