Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 BHLHE23-202ENST00000612929 1109 ntBASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 AC020928.2-201ENST00000588717 2197 ntBASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV2A0A0B4J234 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV2A0A0B4J234 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV2A0A0B4J234 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV2A0A0B4J234 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV2A0A0B4J234 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV2A0A0B4J234 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV2A0A0B4J234 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV2A0A0B4J234 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV2A0A0B4J234 AP003733.4-201ENST00000623785 1697 ntBASIC17.64■□□□□ 0.42
TRAV2A0A0B4J234 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV2A0A0B4J234 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRAV2A0A0B4J234 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV2A0A0B4J234 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV2A0A0B4J234 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV2A0A0B4J234 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV2A0A0B4J234 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV2A0A0B4J234 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV2A0A0B4J234 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV2A0A0B4J234 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRAV2A0A0B4J234 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV2A0A0B4J234 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV2A0A0B4J234 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV2A0A0B4J234 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV2A0A0B4J234 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV2A0A0B4J234 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.62■□□□□ 0.41
TRAV2A0A0B4J234 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV2A0A0B4J234 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV2A0A0B4J234 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRAV2A0A0B4J234 AC022211.4-201ENST00000625094 2161 ntBASIC17.62■□□□□ 0.41
TRAV2A0A0B4J234 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV2A0A0B4J234 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV2A0A0B4J234 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRAV2A0A0B4J234 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRAV2A0A0B4J234 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV2A0A0B4J234 AL033527.3-201ENST00000566366 1196 ntBASIC17.61■□□□□ 0.41
TRAV2A0A0B4J234 AC011551.1-201ENST00000614101 683 ntBASIC17.61■□□□□ 0.41
TRAV2A0A0B4J234 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV2A0A0B4J234 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV2A0A0B4J234 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV2A0A0B4J234 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV2A0A0B4J234 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TRAV2A0A0B4J234 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV2A0A0B4J234 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV2A0A0B4J234 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV2A0A0B4J234 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV2A0A0B4J234 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV2A0A0B4J234 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV2A0A0B4J234 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV2A0A0B4J234 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV2A0A0B4J234 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV2A0A0B4J234 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV2A0A0B4J234 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV2A0A0B4J234 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV2A0A0B4J234 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV2A0A0B4J234 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV2A0A0B4J234 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV2A0A0B4J234 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAV2A0A0B4J234 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV2A0A0B4J234 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV2A0A0B4J234 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV2A0A0B4J234 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV2A0A0B4J234 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV2A0A0B4J234 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV2A0A0B4J234 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRAV2A0A0B4J234 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV2A0A0B4J234 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAV2A0A0B4J234 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV2A0A0B4J234 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRAV2A0A0B4J234 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV2A0A0B4J234 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV2A0A0B4J234 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms