Protein–RNA interactions for Protein: Q08471

MSA1, G1-specific transcription factors activator MSA1, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSA1Q08471 FPR4YLR449W 1179 nt9.89□□□□□ -0.83
MSA1Q08471 FUN26YAL022C 1554 nt9.87□□□□□ -0.83
MSA1Q08471 YLR154C-GYLR154C-G 150 nt9.86□□□□□ -0.83
MSA1Q08471 PAC11YDR488C 1602 nt9.85□□□□□ -0.83
MSA1Q08471 PHO4YFR034C 939 nt9.84□□□□□ -0.83
MSA1Q08471 CCT6YDR188W 1641 nt9.82□□□□□ -0.84
MSA1Q08471 ADO1YJR105W 1023 nt9.79□□□□□ -0.84
MSA1Q08471 MEP2YNL142W 1500 nt9.76□□□□□ -0.85
MSA1Q08471 YEL076C-AYEL076C-A 651 nt9.74□□□□□ -0.85
MSA1Q08471 YEL076CYEL076C 651 nt9.74□□□□□ -0.85
MSA1Q08471 YLR464WYLR464W 651 nt9.74□□□□□ -0.85
MSA1Q08471 Q0182Q0182 405 nt9.73□□□□□ -0.85
MSA1Q08471 SUF2tP(AGG)C 72 nt9.71□□□□□ -0.86
MSA1Q08471 SUF10tP(AGG)N 72 nt9.71□□□□□ -0.86
MSA1Q08471 ERV46YAL042W 1248 nt9.71□□□□□ -0.86
MSA1Q08471 LPX1YOR084W 1164 nt9.71□□□□□ -0.86
MSA1Q08471 UBX6YJL048C 1191 nt9.7□□□□□ -0.86
MSA1Q08471 RTG1YOL067C 534 nt9.67□□□□□ -0.86
MSA1Q08471 NVJ2YPR091C 2313 nt9.67□□□□□ -0.86
MSA1Q08471 SPP1YPL138C 1062 nt9.66□□□□□ -0.86
MSA1Q08471 YJL152WYJL152W 360 nt9.65□□□□□ -0.86
MSA1Q08471 ALF1YNL148C 765 nt9.65□□□□□ -0.86
MSA1Q08471 SIS1YNL007C 1059 nt9.64□□□□□ -0.87
MSA1Q08471 IDH1YNL037C 1083 nt9.64□□□□□ -0.87
MSA1Q08471 DCW1YKL046C 1350 nt9.61□□□□□ -0.87
MSA1Q08471 YDR433WYDR433W 441 nt9.58□□□□□ -0.88
MSA1Q08471 YKR040CYKR040C 504 nt9.58□□□□□ -0.88
MSA1Q08471 FPS1YLL043W 2010 nt9.53□□□□□ -0.88
MSA1Q08471 YBR220CYBR220C 1683 nt9.52□□□□□ -0.89
MSA1Q08471 YDR095CYDR095C 411 nt9.52□□□□□ -0.89
MSA1Q08471 YPS1YLR120C 1710 nt9.52□□□□□ -0.89
MSA1Q08471 GBP2YCL011C 1284 nt9.5□□□□□ -0.89
MSA1Q08471 YDR094WYDR094W 336 nt9.48□□□□□ -0.89
MSA1Q08471 HUA1YGR268C 597 nt9.48□□□□□ -0.89
MSA1Q08471 TIR4YOR009W 1464 nt9.47□□□□□ -0.89
MSA1Q08471 MXR2YCL033C 507 nt9.45□□□□□ -0.9
MSA1Q08471 EMI2YDR516C 1503 nt9.42□□□□□ -0.9
MSA1Q08471 YFL015W-AYFL015W-A 318 nt9.41□□□□□ -0.9
MSA1Q08471 CAC2YML102W 1407 nt9.38□□□□□ -0.91
MSA1Q08471 YHR165W-AYHR165W-A 312 nt9.37□□□□□ -0.91
MSA1Q08471 YMR090WYMR090W 684 nt9.34□□□□□ -0.91
MSA1Q08471 RPP2AYOL039W 321 nt9.34□□□□□ -0.91
MSA1Q08471 PCH2YBR186W 1695 nt9.34□□□□□ -0.91
MSA1Q08471 TCD2YKL027W 1344 nt9.33□□□□□ -0.92
MSA1Q08471 SDH1YKL148C 1923 nt9.33□□□□□ -0.92
MSA1Q08471 YCL048W-AYCL048W-A 240 nt9.33□□□□□ -0.92
MSA1Q08471 GUT2YIL155C 1950 nt9.33□□□□□ -0.92
MSA1Q08471 PET9YBL030C 957 nt9.31□□□□□ -0.92
MSA1Q08471 ART5YGR068C 1761 nt9.31□□□□□ -0.92
MSA1Q08471 YMR057CYMR057C 372 nt9.3□□□□□ -0.92
MSA1Q08471 YDL221WYDL221W 552 nt9.29□□□□□ -0.92
MSA1Q08471 FRD1YEL047C 1413 nt9.29□□□□□ -0.92
MSA1Q08471 PTP1YDL230W 1008 nt9.26□□□□□ -0.93
MSA1Q08471 DED1YOR204W 1815 nt9.24□□□□□ -0.93
MSA1Q08471 GFD2YCL036W 1701 nt9.23□□□□□ -0.93
MSA1Q08471 PIB2YGL023C 1908 nt9.23□□□□□ -0.93
MSA1Q08471 SEC11YIR022W 504 nt9.22□□□□□ -0.93
MSA1Q08471 YKL030WYKL030W 606 nt9.22□□□□□ -0.93
MSA1Q08471 PTH1YHR189W 573 nt9.21□□□□□ -0.94
MSA1Q08471 YLR235CYLR235C 399 nt9.21□□□□□ -0.94
MSA1Q08471 RRD1YIL153W 1182 nt9.2□□□□□ -0.94
MSA1Q08471 YCL042WYCL042W 360 nt9.17□□□□□ -0.94
MSA1Q08471 SOR2YDL246C 1074 nt9.16□□□□□ -0.94
MSA1Q08471 SOR1YJR159W 1074 nt9.16□□□□□ -0.94
MSA1Q08471 SCC4YER147C 1875 nt9.15□□□□□ -0.94
MSA1Q08471 LCB1YMR296C 1677 nt9.13□□□□□ -0.95
MSA1Q08471 SBA1YKL117W 651 nt9.13□□□□□ -0.95
MSA1Q08471 FMT1YBL013W 1206 nt9.11□□□□□ -0.95
MSA1Q08471 PAU16YKL224C 372 nt9.1□□□□□ -0.95
MSA1Q08471 IRC15YPL017C 1500 nt9.09□□□□□ -0.95
MSA1Q08471 YFR018CYFR018C 1092 nt9.08□□□□□ -0.96
MSA1Q08471 RRT5YFR032C 870 nt9.05□□□□□ -0.96
MSA1Q08471 YSC84YHR016C 1407 nt9.05□□□□□ -0.96
MSA1Q08471 tL(GAG)GtL(GAG)G 82 nt9.04□□□□□ -0.96
MSA1Q08471 RTS2YOR077W 699 nt9.04□□□□□ -0.96
MSA1Q08471 FMP52YER004W 696 nt9.03□□□□□ -0.96
MSA1Q08471 RTF1YGL244W 1677 nt9.03□□□□□ -0.96
MSA1Q08471 GIS3YLR094C 1509 nt9.02□□□□□ -0.97
MSA1Q08471 UME6YDR207C 2511 nt9.01□□□□□ -0.97
MSA1Q08471 YHL050CYHL050C 2094 nt9.01□□□□□ -0.97
MSA1Q08471 CUE1YMR264W 612 nt8.99□□□□□ -0.97
MSA1Q08471 TIM23YNR017W 669 nt8.98□□□□□ -0.97
MSA1Q08471 PRE6YOL038W 765 nt8.98□□□□□ -0.97
MSA1Q08471 YJL225CYJL225C 5277 nt8.98□□□□□ -0.97
MSA1Q08471 CWP1YKL096W 720 nt8.97□□□□□ -0.97
MSA1Q08471 PTK1YKL198C 1989 nt8.95□□□□□ -0.98
MSA1Q08471 DIC1YLR348C 897 nt8.93□□□□□ -0.98
MSA1Q08471 ADH2YMR303C 1047 nt8.93□□□□□ -0.98
MSA1Q08471 YPR064WYPR064W 420 nt8.91□□□□□ -0.98
MSA1Q08471 YLR179CYLR179C 606 nt8.9□□□□□ -0.98
MSA1Q08471 SNF6YHL025W 999 nt8.89□□□□□ -0.99
MSA1Q08471 BOP3YNL042W 1191 nt8.89□□□□□ -0.99
MSA1Q08471 RRT12YCR045C 1476 nt8.88□□□□□ -0.99
MSA1Q08471 YIL100WYIL100W 354 nt8.87□□□□□ -0.99
MSA1Q08471 TAD3YLR316C 969 nt8.87□□□□□ -0.99
MSA1Q08471 BOR1YNL275W 1731 nt8.86□□□□□ -0.99
MSA1Q08471 RDN37-1RDN37-1 5354 nt8.86□□□□□ -0.99
MSA1Q08471 RDN37-2RDN37-2 5354 nt8.86□□□□□ -0.99
MSA1Q08471 AHT1YHR093W 549 nt8.83□□□□□ -1
MSA1Q08471 PCM1YEL058W 1674 nt8.83□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms