Protein–RNA interactions for Protein: Q06147

LCB5, Sphingoid long chain base kinase 5, yeastyeast

Known RBP Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB5Q06147 IMT1tM(CAU)O1 72 nt12.77□□□□□ -0.37
LCB5Q06147 IMT2tM(CAU)P 72 nt12.77□□□□□ -0.37
LCB5Q06147 SDH1YKL148C 1923 nt12.7□□□□□ -0.38
LCB5Q06147 TRM9YML014W 840 nt12.68□□□□□ -0.38
LCB5Q06147 PCH2YBR186W 1695 nt12.67□□□□□ -0.38
LCB5Q06147 YDL221WYDL221W 552 nt12.67□□□□□ -0.38
LCB5Q06147 YDR095CYDR095C 411 nt12.65□□□□□ -0.38
LCB5Q06147 YLR281CYLR281C 468 nt12.65□□□□□ -0.38
LCB5Q06147 GUT2YIL155C 1950 nt12.65□□□□□ -0.38
LCB5Q06147 FUN26YAL022C 1554 nt12.64□□□□□ -0.39
LCB5Q06147 PUS2YGL063W 1113 nt12.62□□□□□ -0.39
LCB5Q06147 SEC11YIR022W 504 nt12.59□□□□□ -0.39
LCB5Q06147 WHI5YOR083W 888 nt12.59□□□□□ -0.39
LCB5Q06147 CAC2YML102W 1407 nt12.54□□□□□ -0.4
LCB5Q06147 CCT6YDR188W 1641 nt12.53□□□□□ -0.4
LCB5Q06147 SCC4YER147C 1875 nt12.48□□□□□ -0.41
LCB5Q06147 PTP1YDL230W 1008 nt12.48□□□□□ -0.41
LCB5Q06147 ALF1YNL148C 765 nt12.46□□□□□ -0.41
LCB5Q06147 PIB2YGL023C 1908 nt12.45□□□□□ -0.42
LCB5Q06147 SUF2tP(AGG)C 72 nt12.45□□□□□ -0.42
LCB5Q06147 SUF10tP(AGG)N 72 nt12.45□□□□□ -0.42
LCB5Q06147 RPP2AYOL039W 321 nt12.42□□□□□ -0.42
LCB5Q06147 YLR154C-GYLR154C-G 150 nt12.41□□□□□ -0.42
LCB5Q06147 IMP2'YIL154C 1041 nt12.37□□□□□ -0.43
LCB5Q06147 DSK2YMR276W 1122 nt12.37□□□□□ -0.43
LCB5Q06147 IRC15YPL017C 1500 nt12.36□□□□□ -0.43
LCB5Q06147 FMP45YDL222C 930 nt12.32□□□□□ -0.44
LCB5Q06147 GIS3YLR094C 1509 nt12.3□□□□□ -0.44
LCB5Q06147 YSC84YHR016C 1407 nt12.28□□□□□ -0.44
LCB5Q06147 YLR236CYLR236C 324 nt12.28□□□□□ -0.44
LCB5Q06147 RTF1YGL244W 1677 nt12.27□□□□□ -0.45
LCB5Q06147 YPR011CYPR011C 981 nt12.26□□□□□ -0.45
LCB5Q06147 YJL152WYJL152W 360 nt12.25□□□□□ -0.45
LCB5Q06147 YHL050CYHL050C 2094 nt12.22□□□□□ -0.45
LCB5Q06147 SIS1YNL007C 1059 nt12.22□□□□□ -0.45
LCB5Q06147 YCH1YGR203W 447 nt12.2□□□□□ -0.46
LCB5Q06147 FPS1YLL043W 2010 nt12.16□□□□□ -0.46
LCB5Q06147 VAR1Q0140 1197 nt12.16□□□□□ -0.46
LCB5Q06147 IDH1YNL037C 1083 nt12.14□□□□□ -0.47
LCB5Q06147 PTK1YKL198C 1989 nt12.13□□□□□ -0.47
LCB5Q06147 BOP3YNL042W 1191 nt12.13□□□□□ -0.47
LCB5Q06147 TIR4YOR009W 1464 nt12.09□□□□□ -0.47
LCB5Q06147 RRT12YCR045C 1476 nt12.07□□□□□ -0.48
LCB5Q06147 ERV46YAL042W 1248 nt12.06□□□□□ -0.48
LCB5Q06147 LPX1YOR084W 1164 nt12.06□□□□□ -0.48
LCB5Q06147 GFD2YCL036W 1701 nt12.06□□□□□ -0.48
LCB5Q06147 YJL225CYJL225C 5277 nt12.04□□□□□ -0.48
LCB5Q06147 UME6YDR207C 2511 nt12.03□□□□□ -0.48
LCB5Q06147 ART5YGR068C 1761 nt12.02□□□□□ -0.48
LCB5Q06147 BOR1YNL275W 1731 nt12.01□□□□□ -0.49
LCB5Q06147 YDR433WYDR433W 441 nt12.01□□□□□ -0.49
LCB5Q06147 MRPL8YJL063C 717 nt12.01□□□□□ -0.49
LCB5Q06147 NME1NME1 340 nt12□□□□□ -0.49
LCB5Q06147 RTS2YOR077W 699 nt11.99□□□□□ -0.49
LCB5Q06147 GBP2YCL011C 1284 nt11.98□□□□□ -0.49
LCB5Q06147 PET9YBL030C 957 nt11.97□□□□□ -0.49
LCB5Q06147 YKR040CYKR040C 504 nt11.94□□□□□ -0.5
LCB5Q06147 YMR057CYMR057C 372 nt11.94□□□□□ -0.5
LCB5Q06147 YNL195CYNL195C 786 nt11.93□□□□□ -0.5
LCB5Q06147 YCL048W-AYCL048W-A 240 nt11.93□□□□□ -0.5
LCB5Q06147 CUE1YMR264W 612 nt11.91□□□□□ -0.5
LCB5Q06147 SPP1YPL138C 1062 nt11.9□□□□□ -0.5
LCB5Q06147 ADO1YJR105W 1023 nt11.88□□□□□ -0.51
LCB5Q06147 NCP1YHR042W 2076 nt11.87□□□□□ -0.51
LCB5Q06147 MXR2YCL033C 507 nt11.85□□□□□ -0.51
LCB5Q06147 TCD2YKL027W 1344 nt11.83□□□□□ -0.52
LCB5Q06147 YEL076C-AYEL076C-A 651 nt11.82□□□□□ -0.52
LCB5Q06147 YEL076CYEL076C 651 nt11.82□□□□□ -0.52
LCB5Q06147 YLR464WYLR464W 651 nt11.82□□□□□ -0.52
LCB5Q06147 YFL054CYFL054C 1941 nt11.82□□□□□ -0.52
LCB5Q06147 CSM2YIL132C 642 nt11.81□□□□□ -0.52
LCB5Q06147 SPT8YLR055C 1809 nt11.79□□□□□ -0.52
LCB5Q06147 RTG1YOL067C 534 nt11.78□□□□□ -0.52
LCB5Q06147 YIL100WYIL100W 354 nt11.76□□□□□ -0.53
LCB5Q06147 RRD1YIL153W 1182 nt11.67□□□□□ -0.54
LCB5Q06147 DED1YOR204W 1815 nt11.67□□□□□ -0.54
LCB5Q06147 YDR509WYDR509W 348 nt11.65□□□□□ -0.54
LCB5Q06147 PAU21YOR394W 495 nt11.65□□□□□ -0.54
LCB5Q06147 PAU22YPL282C 495 nt11.65□□□□□ -0.54
LCB5Q06147 FRD1YEL047C 1413 nt11.64□□□□□ -0.55
LCB5Q06147 HUA1YGR268C 597 nt11.63□□□□□ -0.55
LCB5Q06147 PAM17YKR065C 594 nt11.62□□□□□ -0.55
LCB5Q06147 MCH5YOR306C 1566 nt11.62□□□□□ -0.55
LCB5Q06147 YCL042WYCL042W 360 nt11.61□□□□□ -0.55
LCB5Q06147 HSP60YLR259C 1719 nt11.6□□□□□ -0.55
LCB5Q06147 ALG12YNR030W 1656 nt11.59□□□□□ -0.55
LCB5Q06147 SOR2YDL246C 1074 nt11.56□□□□□ -0.56
LCB5Q06147 UBX6YJL048C 1191 nt11.56□□□□□ -0.56
LCB5Q06147 SOR1YJR159W 1074 nt11.56□□□□□ -0.56
LCB5Q06147 ARO7YPR060C 771 nt11.56□□□□□ -0.56
LCB5Q06147 FMT1YBL013W 1206 nt11.53□□□□□ -0.56
LCB5Q06147 FMP52YER004W 696 nt11.52□□□□□ -0.57
LCB5Q06147 PTH1YHR189W 573 nt11.52□□□□□ -0.57
LCB5Q06147 YLR235CYLR235C 399 nt11.52□□□□□ -0.57
LCB5Q06147 SWE1YJL187C 2460 nt11.51□□□□□ -0.57
LCB5Q06147 LCB1YMR296C 1677 nt11.5□□□□□ -0.57
LCB5Q06147 YKL030WYKL030W 606 nt11.49□□□□□ -0.57
LCB5Q06147 RDN37-1RDN37-1 5354 nt11.47□□□□□ -0.57
LCB5Q06147 RDN37-2RDN37-2 5354 nt11.47□□□□□ -0.57
LCB5Q06147 YDR094WYDR094W 336 nt11.44□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms