Protein–RNA interactions for Protein: Q04431

KRE28, Spindle pole body component KRE28, yeastyeast

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
KRE28Q04431 CCT6YDR188W 1641 nt11.79□□□□□ -0.52
KRE28Q04431 YDL221WYDL221W 552 nt11.78□□□□□ -0.52
KRE28Q04431 SUF2tP(AGG)C 72 nt11.72□□□□□ -0.53
KRE28Q04431 SUF10tP(AGG)N 72 nt11.72□□□□□ -0.53
KRE28Q04431 RPP2AYOL039W 321 nt11.71□□□□□ -0.53
KRE28Q04431 SIS1YNL007C 1059 nt11.67□□□□□ -0.54
KRE28Q04431 PTP1YDL230W 1008 nt11.66□□□□□ -0.54
KRE28Q04431 BOR1YNL275W 1731 nt11.64□□□□□ -0.55
KRE28Q04431 MNP1YGL068W 585 nt11.64□□□□□ -0.55
KRE28Q04431 RKM5YLR137W 1104 nt11.63□□□□□ -0.55
KRE28Q04431 SCC4YER147C 1875 nt11.61□□□□□ -0.55
KRE28Q04431 CAC2YML102W 1407 nt11.6□□□□□ -0.55
KRE28Q04431 RTF1YGL244W 1677 nt11.59□□□□□ -0.55
KRE28Q04431 MCH5YOR306C 1566 nt11.51□□□□□ -0.57
KRE28Q04431 YSC84YHR016C 1407 nt11.5□□□□□ -0.57
KRE28Q04431 PTK1YKL198C 1989 nt11.48□□□□□ -0.57
KRE28Q04431 YJL225CYJL225C 5277 nt11.48□□□□□ -0.57
KRE28Q04431 YOL037CYOL037C 354 nt11.47□□□□□ -0.57
KRE28Q04431 PET9YBL030C 957 nt11.44□□□□□ -0.58
KRE28Q04431 IRC15YPL017C 1500 nt11.44□□□□□ -0.58
KRE28Q04431 YHL050CYHL050C 2094 nt11.44□□□□□ -0.58
KRE28Q04431 YCH1YGR203W 447 nt11.43□□□□□ -0.58
KRE28Q04431 ART5YGR068C 1761 nt11.43□□□□□ -0.58
KRE28Q04431 GFD2YCL036W 1701 nt11.41□□□□□ -0.58
KRE28Q04431 BOP3YNL042W 1191 nt11.39□□□□□ -0.59
KRE28Q04431 YOR139CYOR139C 393 nt11.39□□□□□ -0.59
KRE28Q04431 NPL3YDR432W 1245 nt11.36□□□□□ -0.59
KRE28Q04431 GIS3YLR094C 1509 nt11.35□□□□□ -0.59
KRE28Q04431 RDN37-1RDN37-1 5354 nt11.34□□□□□ -0.59
KRE28Q04431 RDN37-2RDN37-2 5354 nt11.34□□□□□ -0.59
KRE28Q04431 TIR4YOR009W 1464 nt11.33□□□□□ -0.6
KRE28Q04431 YLR154C-GYLR154C-G 150 nt11.3□□□□□ -0.6
KRE28Q04431 ALG12YNR030W 1656 nt11.26□□□□□ -0.61
KRE28Q04431 CUE1YMR264W 612 nt11.24□□□□□ -0.61
KRE28Q04431 YMR057CYMR057C 372 nt11.23□□□□□ -0.61
KRE28Q04431 RTS2YOR077W 699 nt11.23□□□□□ -0.61
KRE28Q04431 YLR281CYLR281C 468 nt11.21□□□□□ -0.61
KRE28Q04431 RRT12YCR045C 1476 nt11.2□□□□□ -0.62
KRE28Q04431 YJL152WYJL152W 360 nt11.2□□□□□ -0.62
KRE28Q04431 WHI5YOR083W 888 nt11.19□□□□□ -0.62
KRE28Q04431 SPT8YLR055C 1809 nt11.16□□□□□ -0.62
KRE28Q04431 HSP60YLR259C 1719 nt11.14□□□□□ -0.63
KRE28Q04431 YFL054CYFL054C 1941 nt11.13□□□□□ -0.63
KRE28Q04431 YLR236CYLR236C 324 nt11.1□□□□□ -0.63
KRE28Q04431 YIL100WYIL100W 354 nt11.09□□□□□ -0.63
KRE28Q04431 NCP1YHR042W 2076 nt11.08□□□□□ -0.63
KRE28Q04431 YCL048W-AYCL048W-A 240 nt11.08□□□□□ -0.64
KRE28Q04431 IMP2'YIL154C 1041 nt11.04□□□□□ -0.64
KRE28Q04431 YNL195CYNL195C 786 nt11.03□□□□□ -0.64
KRE28Q04431 IDH1YNL037C 1083 nt11□□□□□ -0.65
KRE28Q04431 PUS2YGL063W 1113 nt10.99□□□□□ -0.65
KRE28Q04431 tM(CAU)CtM(CAU)C 72 nt10.99□□□□□ -0.65
KRE28Q04431 IMT4tM(CAU)E 72 nt10.99□□□□□ -0.65
KRE28Q04431 IMT3tM(CAU)J3 72 nt10.99□□□□□ -0.65
KRE28Q04431 IMT1tM(CAU)O1 72 nt10.99□□□□□ -0.65
KRE28Q04431 IMT2tM(CAU)P 72 nt10.99□□□□□ -0.65
KRE28Q04431 Q0182Q0182 405 nt10.95□□□□□ -0.66
KRE28Q04431 DSK2YMR276W 1122 nt10.94□□□□□ -0.66
KRE28Q04431 GBP2YCL011C 1284 nt10.92□□□□□ -0.66
KRE28Q04431 NAR1YNL240C 1476 nt10.91□□□□□ -0.66
KRE28Q04431 RRD1YIL153W 1182 nt10.87□□□□□ -0.67
KRE28Q04431 GLK1YCL040W 1503 nt10.87□□□□□ -0.67
KRE28Q04431 SWE1YJL187C 2460 nt10.86□□□□□ -0.67
KRE28Q04431 TCD2YKL027W 1344 nt10.84□□□□□ -0.67
KRE28Q04431 FMP52YER004W 696 nt10.84□□□□□ -0.67
KRE28Q04431 YPR011CYPR011C 981 nt10.81□□□□□ -0.68
KRE28Q04431 DED1YOR204W 1815 nt10.8□□□□□ -0.68
KRE28Q04431 HSL7YBR133C 2484 nt10.78□□□□□ -0.68
KRE28Q04431 FMP45YDL222C 930 nt10.77□□□□□ -0.69
KRE28Q04431 YDR433WYDR433W 441 nt10.76□□□□□ -0.69
KRE28Q04431 ERV46YAL042W 1248 nt10.76□□□□□ -0.69
KRE28Q04431 YKR040CYKR040C 504 nt10.71□□□□□ -0.69
KRE28Q04431 FMT1YBL013W 1206 nt10.71□□□□□ -0.69
KRE28Q04431 PCM1YEL058W 1674 nt10.69□□□□□ -0.7
KRE28Q04431 LPX1YOR084W 1164 nt10.67□□□□□ -0.7
KRE28Q04431 MXR2YCL033C 507 nt10.67□□□□□ -0.7
KRE28Q04431 SOR2YDL246C 1074 nt10.66□□□□□ -0.7
KRE28Q04431 SOR1YJR159W 1074 nt10.66□□□□□ -0.7
KRE28Q04431 LCB1YMR296C 1677 nt10.65□□□□□ -0.7
KRE28Q04431 CMP2YML057W 1815 nt10.65□□□□□ -0.71
KRE28Q04431 AAC1YMR056C 930 nt10.64□□□□□ -0.71
KRE28Q04431 PBP1YGR178C 2169 nt10.64□□□□□ -0.71
KRE28Q04431 FUR4YBR021W 1902 nt10.62□□□□□ -0.71
KRE28Q04431 CWP1YKL096W 720 nt10.62□□□□□ -0.71
KRE28Q04431 YCL042WYCL042W 360 nt10.62□□□□□ -0.71
KRE28Q04431 ADH2YMR303C 1047 nt10.61□□□□□ -0.71
KRE28Q04431 RDN25-1RDN25-1 3396 nt10.6□□□□□ -0.71
KRE28Q04431 RDN25-2RDN25-2 3396 nt10.6□□□□□ -0.71
KRE28Q04431 SNF6YHL025W 999 nt10.6□□□□□ -0.71
KRE28Q04431 CYT2YKL087C 675 nt10.59□□□□□ -0.71
KRE28Q04431 BIO5YNR056C 1686 nt10.59□□□□□ -0.71
KRE28Q04431 SIM1YIL123W 1431 nt10.58□□□□□ -0.72
KRE28Q04431 FRD1YEL047C 1413 nt10.58□□□□□ -0.72
KRE28Q04431 PRP4YPR178W 1398 nt10.56□□□□□ -0.72
KRE28Q04431 DPS1YLL018C 1674 nt10.53□□□□□ -0.72
KRE28Q04431 YEL076C-AYEL076C-A 651 nt10.52□□□□□ -0.73
KRE28Q04431 YEL076CYEL076C 651 nt10.52□□□□□ -0.73
KRE28Q04431 YLR464WYLR464W 651 nt10.52□□□□□ -0.73
KRE28Q04431 BIO4YNR057C 714 nt10.52□□□□□ -0.73
KRE28Q04431 YIH1YCR059C 777 nt10.51□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms