Protein–RNA interactions for Protein: P47153

TDA4, Topoisomerase I damage affected protein 4, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA4P47153 FUN26YAL022C 1554 nt9.8□□□□□ -0.84
TDA4P47153 TRM9YML014W 840 nt9.79□□□□□ -0.84
TDA4P47153 NVJ2YPR091C 2313 nt9.78□□□□□ -0.84
TDA4P47153 SCC4YER147C 1875 nt9.77□□□□□ -0.85
TDA4P47153 MNP1YGL068W 585 nt9.76□□□□□ -0.85
TDA4P47153 ALF1YNL148C 765 nt9.74□□□□□ -0.85
TDA4P47153 IRC15YPL017C 1500 nt9.72□□□□□ -0.85
TDA4P47153 RKM5YLR137W 1104 nt9.7□□□□□ -0.86
TDA4P47153 CCT6YDR188W 1641 nt9.68□□□□□ -0.86
TDA4P47153 PIB2YGL023C 1908 nt9.66□□□□□ -0.86
TDA4P47153 GIS3YLR094C 1509 nt9.66□□□□□ -0.86
TDA4P47153 SUF2tP(AGG)C 72 nt9.64□□□□□ -0.87
TDA4P47153 SUF10tP(AGG)N 72 nt9.64□□□□□ -0.87
TDA4P47153 SIS1YNL007C 1059 nt9.64□□□□□ -0.87
TDA4P47153 YOL037CYOL037C 354 nt9.64□□□□□ -0.87
TDA4P47153 NPL3YDR432W 1245 nt9.63□□□□□ -0.87
TDA4P47153 YOR139CYOR139C 393 nt9.63□□□□□ -0.87
TDA4P47153 YSC84YHR016C 1407 nt9.59□□□□□ -0.87
TDA4P47153 RTF1YGL244W 1677 nt9.55□□□□□ -0.88
TDA4P47153 YHL050CYHL050C 2094 nt9.54□□□□□ -0.88
TDA4P47153 GFD2YCL036W 1701 nt9.53□□□□□ -0.88
TDA4P47153 ART5YGR068C 1761 nt9.5□□□□□ -0.89
TDA4P47153 BOP3YNL042W 1191 nt9.46□□□□□ -0.9
TDA4P47153 PET9YBL030C 957 nt9.45□□□□□ -0.9
TDA4P47153 RTS2YOR077W 699 nt9.45□□□□□ -0.9
TDA4P47153 RRT12YCR045C 1476 nt9.42□□□□□ -0.9
TDA4P47153 CUE1YMR264W 612 nt9.42□□□□□ -0.9
TDA4P47153 PTK1YKL198C 1989 nt9.42□□□□□ -0.9
TDA4P47153 YCH1YGR203W 447 nt9.39□□□□□ -0.91
TDA4P47153 YLR154C-GYLR154C-G 150 nt9.38□□□□□ -0.91
TDA4P47153 YLR281CYLR281C 468 nt9.37□□□□□ -0.91
TDA4P47153 YNL195CYNL195C 786 nt9.37□□□□□ -0.91
TDA4P47153 WHI5YOR083W 888 nt9.36□□□□□ -0.91
TDA4P47153 TIR4YOR009W 1464 nt9.33□□□□□ -0.92
TDA4P47153 YJL152WYJL152W 360 nt9.32□□□□□ -0.92
TDA4P47153 FPS1YLL043W 2010 nt9.3□□□□□ -0.92
TDA4P47153 YIL100WYIL100W 354 nt9.29□□□□□ -0.92
TDA4P47153 NCP1YHR042W 2076 nt9.28□□□□□ -0.92
TDA4P47153 tM(CAU)CtM(CAU)C 72 nt9.28□□□□□ -0.92
TDA4P47153 IMT4tM(CAU)E 72 nt9.28□□□□□ -0.92
TDA4P47153 IMT3tM(CAU)J3 72 nt9.28□□□□□ -0.92
TDA4P47153 IMT1tM(CAU)O1 72 nt9.28□□□□□ -0.92
TDA4P47153 IMT2tM(CAU)P 72 nt9.28□□□□□ -0.92
TDA4P47153 PUS2YGL063W 1113 nt9.26□□□□□ -0.93
TDA4P47153 Q0182Q0182 405 nt9.25□□□□□ -0.93
TDA4P47153 IMP2'YIL154C 1041 nt9.22□□□□□ -0.93
TDA4P47153 YMR057CYMR057C 372 nt9.22□□□□□ -0.93
TDA4P47153 BOR1YNL275W 1731 nt9.2□□□□□ -0.94
TDA4P47153 YLR236CYLR236C 324 nt9.19□□□□□ -0.94
TDA4P47153 YCL048W-AYCL048W-A 240 nt9.18□□□□□ -0.94
TDA4P47153 YFL054CYFL054C 1941 nt9.17□□□□□ -0.94
TDA4P47153 DSK2YMR276W 1122 nt9.17□□□□□ -0.94
TDA4P47153 IDH1YNL037C 1083 nt9.17□□□□□ -0.94
TDA4P47153 SPT8YLR055C 1809 nt9.17□□□□□ -0.94
TDA4P47153 UME6YDR207C 2511 nt9.11□□□□□ -0.95
TDA4P47153 GBP2YCL011C 1284 nt9.08□□□□□ -0.96
TDA4P47153 LCB1YMR296C 1677 nt9.04□□□□□ -0.96
TDA4P47153 FMP45YDL222C 930 nt9.04□□□□□ -0.96
TDA4P47153 YPR011CYPR011C 981 nt9.04□□□□□ -0.96
TDA4P47153 YDR433WYDR433W 441 nt9.01□□□□□ -0.97
TDA4P47153 TCD2YKL027W 1344 nt9□□□□□ -0.97
TDA4P47153 ERV46YAL042W 1248 nt8.98□□□□□ -0.97
TDA4P47153 SWE1YJL187C 2460 nt8.97□□□□□ -0.97
TDA4P47153 HSP60YLR259C 1719 nt8.95□□□□□ -0.98
TDA4P47153 RRD1YIL153W 1182 nt8.94□□□□□ -0.98
TDA4P47153 LPX1YOR084W 1164 nt8.94□□□□□ -0.98
TDA4P47153 YKR040CYKR040C 504 nt8.92□□□□□ -0.98
TDA4P47153 FMP52YER004W 696 nt8.9□□□□□ -0.98
TDA4P47153 MXR2YCL033C 507 nt8.9□□□□□ -0.98
TDA4P47153 ALG12YNR030W 1656 nt8.9□□□□□ -0.98
TDA4P47153 LYS4YDR234W 2082 nt8.89□□□□□ -0.99
TDA4P47153 DED1YOR204W 1815 nt8.89□□□□□ -0.99
TDA4P47153 MOT3YMR070W 1473 nt8.89□□□□□ -0.99
TDA4P47153 MCH5YOR306C 1566 nt8.86□□□□□ -0.99
TDA4P47153 GLK1YCL040W 1503 nt8.84□□□□□ -0.99
TDA4P47153 SIM1YIL123W 1431 nt8.82□□□□□ -1
TDA4P47153 FMT1YBL013W 1206 nt8.82□□□□□ -1
TDA4P47153 YCL042WYCL042W 360 nt8.82□□□□□ -1
TDA4P47153 SOR2YDL246C 1074 nt8.8□□□□□ -1
TDA4P47153 SOR1YJR159W 1074 nt8.8□□□□□ -1
TDA4P47153 CWP1YKL096W 720 nt8.77□□□□□ -1.01
TDA4P47153 BIO4YNR057C 714 nt8.77□□□□□ -1.01
TDA4P47153 PCM1YEL058W 1674 nt8.77□□□□□ -1.01
TDA4P47153 FRD1YEL047C 1413 nt8.77□□□□□ -1.01
TDA4P47153 ADH2YMR303C 1047 nt8.74□□□□□ -1.01
TDA4P47153 SNF6YHL025W 999 nt8.73□□□□□ -1.01
TDA4P47153 FUR4YBR021W 1902 nt8.73□□□□□ -1.01
TDA4P47153 SPP1YPL138C 1062 nt8.72□□□□□ -1.01
TDA4P47153 YHR056W-AYHR056W-A 435 nt8.66□□□□□ -1.02
TDA4P47153 ERF2YLR246W 1080 nt8.66□□□□□ -1.02
TDA4P47153 PRP4YPR178W 1398 nt8.65□□□□□ -1.02
TDA4P47153 CRR1YLR213C 1269 nt8.65□□□□□ -1.02
TDA4P47153 AAC1YMR056C 930 nt8.65□□□□□ -1.02
TDA4P47153 YLR235CYLR235C 399 nt8.64□□□□□ -1.03
TDA4P47153 YIH1YCR059C 777 nt8.63□□□□□ -1.03
TDA4P47153 YEL076C-AYEL076C-A 651 nt8.63□□□□□ -1.03
TDA4P47153 YEL076CYEL076C 651 nt8.63□□□□□ -1.03
TDA4P47153 YLR464WYLR464W 651 nt8.63□□□□□ -1.03
TDA4P47153 RNQ1YCL028W 1218 nt8.62□□□□□ -1.03
TDA4P47153 DPS1YLL018C 1674 nt8.6□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms