Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 PAC11YDR488C 1602 nt12.33□□□□□ -0.44
RPH1P39956 PUS2YGL063W 1113 nt12.32□□□□□ -0.44
RPH1P39956 YLR154C-GYLR154C-G 150 nt12.25□□□□□ -0.45
RPH1P39956 SIS1YNL007C 1059 nt12.21□□□□□ -0.45
RPH1P39956 MEP2YNL142W 1500 nt12.21□□□□□ -0.46
RPH1P39956 YJL152WYJL152W 360 nt12.19□□□□□ -0.46
RPH1P39956 RPP2AYOL039W 321 nt12.17□□□□□ -0.46
RPH1P39956 TAT1YBR069C 1860 nt12.11□□□□□ -0.47
RPH1P39956 NVJ2YPR091C 2313 nt12.11□□□□□ -0.47
RPH1P39956 DSK2YMR276W 1122 nt12.08□□□□□ -0.48
RPH1P39956 IMP2'YIL154C 1041 nt12.07□□□□□ -0.48
RPH1P39956 PTP1YDL230W 1008 nt12.04□□□□□ -0.48
RPH1P39956 TIR4YOR009W 1464 nt12.02□□□□□ -0.48
RPH1P39956 DCW1YKL046C 1350 nt12.02□□□□□ -0.49
RPH1P39956 ART5YGR068C 1761 nt12.02□□□□□ -0.49
RPH1P39956 FMP45YDL222C 930 nt11.99□□□□□ -0.49
RPH1P39956 YCH1YGR203W 447 nt11.99□□□□□ -0.49
RPH1P39956 YPR011CYPR011C 981 nt11.99□□□□□ -0.49
RPH1P39956 PET9YBL030C 957 nt11.98□□□□□ -0.49
RPH1P39956 YLR236CYLR236C 324 nt11.97□□□□□ -0.49
RPH1P39956 IDH1YNL037C 1083 nt11.96□□□□□ -0.49
RPH1P39956 CAC2YML102W 1407 nt11.94□□□□□ -0.5
RPH1P39956 YMR057CYMR057C 372 nt11.94□□□□□ -0.5
RPH1P39956 GFD2YCL036W 1701 nt11.93□□□□□ -0.5
RPH1P39956 MOT3YMR070W 1473 nt11.91□□□□□ -0.5
RPH1P39956 EMI2YDR516C 1503 nt11.9□□□□□ -0.5
RPH1P39956 YCL048W-AYCL048W-A 240 nt11.89□□□□□ -0.51
RPH1P39956 YMR090WYMR090W 684 nt11.87□□□□□ -0.51
RPH1P39956 GBP2YCL011C 1284 nt11.85□□□□□ -0.51
RPH1P39956 YDR433WYDR433W 441 nt11.84□□□□□ -0.51
RPH1P39956 YDL221WYDL221W 552 nt11.81□□□□□ -0.52
RPH1P39956 RTS2YOR077W 699 nt11.81□□□□□ -0.52
RPH1P39956 LPX1YOR084W 1164 nt11.81□□□□□ -0.52
RPH1P39956 ERV46YAL042W 1248 nt11.76□□□□□ -0.53
RPH1P39956 IRC15YPL017C 1500 nt11.75□□□□□ -0.53
RPH1P39956 YKR040CYKR040C 504 nt11.72□□□□□ -0.53
RPH1P39956 TCD2YKL027W 1344 nt11.71□□□□□ -0.53
RPH1P39956 MXR2YCL033C 507 nt11.7□□□□□ -0.54
RPH1P39956 FPS1YLL043W 2010 nt11.69□□□□□ -0.54
RPH1P39956 GIS3YLR094C 1509 nt11.69□□□□□ -0.54
RPH1P39956 CUE1YMR264W 612 nt11.68□□□□□ -0.54
RPH1P39956 SDH1YKL148C 1923 nt11.62□□□□□ -0.55
RPH1P39956 SPP1YPL138C 1062 nt11.61□□□□□ -0.55
RPH1P39956 SCC4YER147C 1875 nt11.6□□□□□ -0.55
RPH1P39956 YIL100WYIL100W 354 nt11.6□□□□□ -0.55
RPH1P39956 YBR220CYBR220C 1683 nt11.59□□□□□ -0.55
RPH1P39956 RRD1YIL153W 1182 nt11.57□□□□□ -0.56
RPH1P39956 DED1YOR204W 1815 nt11.54□□□□□ -0.56
RPH1P39956 YCL042WYCL042W 360 nt11.5□□□□□ -0.57
RPH1P39956 MRPL8YJL063C 717 nt11.46□□□□□ -0.57
RPH1P39956 FRD1YEL047C 1413 nt11.45□□□□□ -0.58
RPH1P39956 FMT1YBL013W 1206 nt11.44□□□□□ -0.58
RPH1P39956 YNL195CYNL195C 786 nt11.43□□□□□ -0.58
RPH1P39956 FMP52YER004W 696 nt11.42□□□□□ -0.58
RPH1P39956 ADO1YJR105W 1023 nt11.39□□□□□ -0.59
RPH1P39956 CWP1YKL096W 720 nt11.39□□□□□ -0.59
RPH1P39956 SOR2YDL246C 1074 nt11.38□□□□□ -0.59
RPH1P39956 YEL076C-AYEL076C-A 651 nt11.38□□□□□ -0.59
RPH1P39956 YEL076CYEL076C 651 nt11.38□□□□□ -0.59
RPH1P39956 SOR1YJR159W 1074 nt11.38□□□□□ -0.59
RPH1P39956 YLR464WYLR464W 651 nt11.38□□□□□ -0.59
RPH1P39956 RTG1YOL067C 534 nt11.38□□□□□ -0.59
RPH1P39956 PCH2YBR186W 1695 nt11.36□□□□□ -0.59
RPH1P39956 GUT2YIL155C 1950 nt11.34□□□□□ -0.59
RPH1P39956 PTH1YHR189W 573 nt11.34□□□□□ -0.59
RPH1P39956 ADH2YMR303C 1047 nt11.33□□□□□ -0.6
RPH1P39956 RRT12YCR045C 1476 nt11.31□□□□□ -0.6
RPH1P39956 YLR235CYLR235C 399 nt11.3□□□□□ -0.6
RPH1P39956 YSC84YHR016C 1407 nt11.29□□□□□ -0.6
RPH1P39956 PCM1YEL058W 1674 nt11.29□□□□□ -0.6
RPH1P39956 SNF6YHL025W 999 nt11.27□□□□□ -0.61
RPH1P39956 HUA1YGR268C 597 nt11.26□□□□□ -0.61
RPH1P39956 YKL030WYKL030W 606 nt11.25□□□□□ -0.61
RPH1P39956 UME6YDR207C 2511 nt11.24□□□□□ -0.61
RPH1P39956 YHL050CYHL050C 2094 nt11.2□□□□□ -0.62
RPH1P39956 SEC11YIR022W 504 nt11.19□□□□□ -0.62
RPH1P39956 PIB2YGL023C 1908 nt11.18□□□□□ -0.62
RPH1P39956 LCB1YMR296C 1677 nt11.17□□□□□ -0.62
RPH1P39956 DIC1YLR348C 897 nt11.16□□□□□ -0.62
RPH1P39956 TIM23YNR017W 669 nt11.13□□□□□ -0.63
RPH1P39956 RNQ1YCL028W 1218 nt11.13□□□□□ -0.63
RPH1P39956 SIM1YIL123W 1431 nt11.11□□□□□ -0.63
RPH1P39956 YIH1YCR059C 777 nt11.11□□□□□ -0.63
RPH1P39956 YLR179CYLR179C 606 nt11.09□□□□□ -0.63
RPH1P39956 BIO4YNR057C 714 nt11.05□□□□□ -0.64
RPH1P39956 YLL053CYLL053C 459 nt11.04□□□□□ -0.64
RPH1P39956 UBX6YJL048C 1191 nt11.03□□□□□ -0.64
RPH1P39956 YPR064WYPR064W 420 nt11.01□□□□□ -0.65
RPH1P39956 BOR1YNL275W 1731 nt10.98□□□□□ -0.65
RPH1P39956 FTR1YER145C 1215 nt10.96□□□□□ -0.65
RPH1P39956 RTF1YGL244W 1677 nt10.95□□□□□ -0.66
RPH1P39956 YDR094WYDR094W 336 nt10.95□□□□□ -0.66
RPH1P39956 tL(GAG)GtL(GAG)G 82 nt10.95□□□□□ -0.66
RPH1P39956 TAD3YLR316C 969 nt10.93□□□□□ -0.66
RPH1P39956 AQY1YPR192W 918 nt10.93□□□□□ -0.66
RPH1P39956 GAL1YBR020W 1587 nt10.93□□□□□ -0.66
RPH1P39956 TRM5YHR070W 1500 nt10.91□□□□□ -0.66
RPH1P39956 AHT1YHR093W 549 nt10.91□□□□□ -0.66
RPH1P39956 ERF2YLR246W 1080 nt10.9□□□□□ -0.66
RPH1P39956 BOP3YNL042W 1191 nt10.9□□□□□ -0.66
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms