Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 NVJ2YPR091C 2313 nt12.45□□□□□ -0.42
MRPL40P36534 SIS1YNL007C 1059 nt12.44□□□□□ -0.42
MRPL40P36534 IMP2'YIL154C 1041 nt12.42□□□□□ -0.42
MRPL40P36534 MEP2YNL142W 1500 nt12.38□□□□□ -0.43
MRPL40P36534 DSK2YMR276W 1122 nt12.38□□□□□ -0.43
MRPL40P36534 RPP2AYOL039W 321 nt12.38□□□□□ -0.43
MRPL40P36534 SPT5YML010W 3192 nt12.38□□□□□ -0.43
MRPL40P36534 FPS1YLL043W 2010 nt12.35□□□□□ -0.43
MRPL40P36534 YJL152WYJL152W 360 nt12.35□□□□□ -0.43
MRPL40P36534 MOT3YMR070W 1473 nt12.34□□□□□ -0.43
MRPL40P36534 FMP45YDL222C 930 nt12.28□□□□□ -0.44
MRPL40P36534 YLR236CYLR236C 324 nt12.28□□□□□ -0.44
MRPL40P36534 YPR011CYPR011C 981 nt12.26□□□□□ -0.45
MRPL40P36534 TIR4YOR009W 1464 nt12.26□□□□□ -0.45
MRPL40P36534 PTP1YDL230W 1008 nt12.25□□□□□ -0.45
MRPL40P36534 YCH1YGR203W 447 nt12.24□□□□□ -0.45
MRPL40P36534 IDH1YNL037C 1083 nt12.22□□□□□ -0.45
MRPL40P36534 ART5YGR068C 1761 nt12.2□□□□□ -0.46
MRPL40P36534 PET9YBL030C 957 nt12.19□□□□□ -0.46
MRPL40P36534 Q0182Q0182 405 nt12.18□□□□□ -0.46
MRPL40P36534 DCW1YKL046C 1350 nt12.16□□□□□ -0.46
MRPL40P36534 GFD2YCL036W 1701 nt12.14□□□□□ -0.47
MRPL40P36534 SSA4YER103W 1929 nt12.12□□□□□ -0.47
MRPL40P36534 CAC2YML102W 1407 nt12.11□□□□□ -0.47
MRPL40P36534 ERV46YAL042W 1248 nt12.1□□□□□ -0.47
MRPL40P36534 YMR057CYMR057C 372 nt12.1□□□□□ -0.47
MRPL40P36534 LPX1YOR084W 1164 nt12.07□□□□□ -0.48
MRPL40P36534 GBP2YCL011C 1284 nt12.07□□□□□ -0.48
MRPL40P36534 YCL048W-AYCL048W-A 240 nt12.07□□□□□ -0.48
MRPL40P36534 YDR433WYDR433W 441 nt12.06□□□□□ -0.48
MRPL40P36534 EMI2YDR516C 1503 nt12.06□□□□□ -0.48
MRPL40P36534 YMR090WYMR090W 684 nt12.01□□□□□ -0.49
MRPL40P36534 YDL221WYDL221W 552 nt11.99□□□□□ -0.49
MRPL40P36534 MRPL8YJL063C 717 nt11.99□□□□□ -0.49
MRPL40P36534 YKR040CYKR040C 504 nt11.99□□□□□ -0.49
MRPL40P36534 RTS2YOR077W 699 nt11.96□□□□□ -0.49
MRPL40P36534 IRC15YPL017C 1500 nt11.94□□□□□ -0.5
MRPL40P36534 TCD2YKL027W 1344 nt11.93□□□□□ -0.5
MRPL40P36534 MXR2YCL033C 507 nt11.91□□□□□ -0.5
MRPL40P36534 CUE1YMR264W 612 nt11.89□□□□□ -0.51
MRPL40P36534 ADO1YJR105W 1023 nt11.87□□□□□ -0.51
MRPL40P36534 SPP1YPL138C 1062 nt11.86□□□□□ -0.51
MRPL40P36534 GIS3YLR094C 1509 nt11.83□□□□□ -0.52
MRPL40P36534 BDF1YLR399C 2061 nt11.8□□□□□ -0.52
MRPL40P36534 RRD1YIL153W 1182 nt11.8□□□□□ -0.52
MRPL40P36534 SDH1YKL148C 1923 nt11.79□□□□□ -0.52
MRPL40P36534 DED1YOR204W 1815 nt11.79□□□□□ -0.52
MRPL40P36534 YEL076C-AYEL076C-A 651 nt11.77□□□□□ -0.53
MRPL40P36534 YEL076CYEL076C 651 nt11.77□□□□□ -0.53
MRPL40P36534 YIL100WYIL100W 354 nt11.77□□□□□ -0.53
MRPL40P36534 YLR464WYLR464W 651 nt11.77□□□□□ -0.53
MRPL40P36534 SCC4YER147C 1875 nt11.76□□□□□ -0.53
MRPL40P36534 RTG1YOL067C 534 nt11.73□□□□□ -0.53
MRPL40P36534 YBR220CYBR220C 1683 nt11.73□□□□□ -0.53
MRPL40P36534 FRD1YEL047C 1413 nt11.72□□□□□ -0.53
MRPL40P36534 YCL042WYCL042W 360 nt11.71□□□□□ -0.53
MRPL40P36534 FMP52YER004W 696 nt11.7□□□□□ -0.54
MRPL40P36534 SOR2YDL246C 1074 nt11.68□□□□□ -0.54
MRPL40P36534 SOR1YJR159W 1074 nt11.68□□□□□ -0.54
MRPL40P36534 FMT1YBL013W 1206 nt11.66□□□□□ -0.54
MRPL40P36534 TAT1YBR069C 1860 nt11.63□□□□□ -0.55
MRPL40P36534 HUA1YGR268C 597 nt11.59□□□□□ -0.55
MRPL40P36534 UBX6YJL048C 1191 nt11.57□□□□□ -0.56
MRPL40P36534 CWP1YKL096W 720 nt11.57□□□□□ -0.56
MRPL40P36534 YLR235CYLR235C 399 nt11.57□□□□□ -0.56
MRPL40P36534 YNL195CYNL195C 786 nt11.57□□□□□ -0.56
MRPL40P36534 PTH1YHR189W 573 nt11.55□□□□□ -0.56
MRPL40P36534 ADH2YMR303C 1047 nt11.53□□□□□ -0.56
MRPL40P36534 YKL030WYKL030W 606 nt11.52□□□□□ -0.57
MRPL40P36534 PCM1YEL058W 1674 nt11.48□□□□□ -0.57
MRPL40P36534 SNF6YHL025W 999 nt11.47□□□□□ -0.57
MRPL40P36534 YSC84YHR016C 1407 nt11.43□□□□□ -0.58
MRPL40P36534 LCB1YMR296C 1677 nt11.42□□□□□ -0.58
MRPL40P36534 RRT12YCR045C 1476 nt11.41□□□□□ -0.58
MRPL40P36534 DIC1YLR348C 897 nt11.41□□□□□ -0.58
MRPL40P36534 UME6YDR207C 2511 nt11.41□□□□□ -0.58
MRPL40P36534 YDR094WYDR094W 336 nt11.4□□□□□ -0.58
MRPL40P36534 TIM23YNR017W 669 nt11.38□□□□□ -0.59
MRPL40P36534 RNQ1YCL028W 1218 nt11.37□□□□□ -0.59
MRPL40P36534 YIH1YCR059C 777 nt11.36□□□□□ -0.59
MRPL40P36534 SEC11YIR022W 504 nt11.36□□□□□ -0.59
MRPL40P36534 YHL050CYHL050C 2094 nt11.35□□□□□ -0.59
MRPL40P36534 YLR179CYLR179C 606 nt11.3□□□□□ -0.6
MRPL40P36534 SIM1YIL123W 1431 nt11.26□□□□□ -0.61
MRPL40P36534 BIO4YNR057C 714 nt11.25□□□□□ -0.61
MRPL40P36534 YPR064WYPR064W 420 nt11.25□□□□□ -0.61
MRPL40P36534 tL(GAG)GtL(GAG)G 82 nt11.24□□□□□ -0.61
MRPL40P36534 YLL053CYLL053C 459 nt11.23□□□□□ -0.61
MRPL40P36534 AQY1YPR192W 918 nt11.21□□□□□ -0.61
MRPL40P36534 PCH2YBR186W 1695 nt11.2□□□□□ -0.62
MRPL40P36534 FTR1YER145C 1215 nt11.18□□□□□ -0.62
MRPL40P36534 AHT1YHR093W 549 nt11.18□□□□□ -0.62
MRPL40P36534 TAD3YLR316C 969 nt11.18□□□□□ -0.62
MRPL40P36534 WSC2YNL283C 1512 nt11.17□□□□□ -0.62
MRPL40P36534 YFL015W-AYFL015W-A 318 nt11.16□□□□□ -0.62
MRPL40P36534 GAL1YBR020W 1587 nt11.13□□□□□ -0.63
MRPL40P36534 ERF2YLR246W 1080 nt11.11□□□□□ -0.63
MRPL40P36534 YJL225CYJL225C 5277 nt11.11□□□□□ -0.63
MRPL40P36534 GUT2YIL155C 1950 nt11.1□□□□□ -0.63
MRPL40P36534 YFR018CYFR018C 1092 nt11.1□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms