Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC9.34□□□□□ -0.916e-7■■■■■ 62.2
U2AF2P26368 WAC-212ENST00000448193 506 ntTSL 229.52■■■□□ 2.322e-23■■■■■ 61.9
U2AF2P26368 WAC-220ENST00000532233 543 ntTSL 416.4■□□□□ 0.222e-23■■■■■ 61.9
U2AF2P26368 WAC-218ENST00000528491 507 ntTSL 416■□□□□ 0.152e-23■■■■■ 61.9
U2AF2P26368 WAC-217ENST00000526722 585 ntTSL 416■□□□□ 0.152e-23■■■■■ 61.9
U2AF2P26368 WAC-219ENST00000530865 468 ntTSL 24.02□□□□□ -1.772e-23■■■■■ 61.9
U2AF2P26368 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC15.66■□□□□ 0.13e-7■■■■■ 61.6
U2AF2P26368 BAG6-235ENST00000362049 3626 ntTSL 2 BASIC14.41□□□□□ -0.13e-7■■■■■ 61.6
U2AF2P26368 BAG6-236ENST00000375964 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.173e-7■■■■■ 61.6
U2AF2P26368 BAG6-234ENST00000211379 3779 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.193e-7■■■■■ 61.6
U2AF2P26368 BAG6-237ENST00000375976 3644 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.293e-7■■■■■ 61.6
U2AF2P26368 HSPH1-208ENST00000629751 1034 ntTSL 220.81■□□□□ 0.923e-14■■■■■ 61.5
U2AF2P26368 ALKBH1-204ENST00000557057 1750 ntTSL 320.79■□□□□ 0.921e-14■■■■■ 60.7
U2AF2P26368 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.111e-14■■■■■ 60.7
U2AF2P26368 ALKBH1-203ENST00000555100 649 ntTSL 313.98□□□□□ -0.171e-14■■■■■ 60.7
U2AF2P26368 ALKBH1-202ENST00000554097 497 ntTSL 31.69□□□□□ -2.141e-14■■■■■ 60.7
U2AF2P26368 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.38■■□□□ 1.655e-7■■■■■ 60.3
U2AF2P26368 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.181e-6■■■■■ 59.8
U2AF2P26368 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.49■□□□□ 0.232e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.49■□□□□ 0.232e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC15.91■□□□□ 0.142e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC15.84■□□□□ 0.132e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.132e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-211ENST00000481956 484 ntTSL 314.13□□□□□ -0.152e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-203ENST00000359980 2997 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.162e-11■■■■■ 59.6
U2AF2P26368 ZFYVE27-206ENST00000393677 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.192e-11■■■■■ 59.6
U2AF2P26368 ATP6V0A1-216ENST00000587882 780 ntTSL 24.32□□□□□ -1.724e-22■■■■■ 59.5
U2AF2P26368 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.14■□□□□ 0.819e-13■■■■■ 58.6
U2AF2P26368 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.729e-13■■■■■ 58.6
U2AF2P26368 TCP11L2-202ENST00000546625 3198 ntTSL 1 (best) BASIC12.73□□□□□ -0.379e-13■■■■■ 58.6
U2AF2P26368 TCP11L2-209ENST00000553098 985 ntTSL 512.56□□□□□ -0.49e-13■■■■■ 58.6
U2AF2P26368 EHBP1-216ENST00000471179 588 ntTSL 219.02■□□□□ 0.647e-21■■■■■ 58.4
U2AF2P26368 PCM1-205ENST00000517836 580 ntTSL 33.33□□□□□ -1.883e-12■■■■■ 58.3
U2AF2P26368 DDX46-211ENST00000513987 543 ntTSL 38.09□□□□□ -1.111e-16■■■■■ 58.2
U2AF2P26368 SLMAP-214ENST00000467901 2698 ntTSL 28.41□□□□□ -1.067e-11■■■■■ 58
U2AF2P26368 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.767e-10■■■■■ 58
U2AF2P26368 SF3B1-208ENST00000470268 2003 ntTSL 25.4□□□□□ -1.552e-11■■■■■ 57.1
U2AF2P26368 SF3B1-210ENST00000482158 772 ntTSL 23.23□□□□□ -1.892e-11■■■■■ 57.1
U2AF2P26368 DDX5-228ENST00000584279 676 ntTSL 322.11■■□□□ 1.134e-11■■■■■ 56.9
U2AF2P26368 DDX5-224ENST00000583239 474 ntTSL 413.03□□□□□ -0.324e-11■■■■■ 56.9
U2AF2P26368 DDX5-231ENST00000585060 572 ntTSL 410.54□□□□□ -0.724e-11■■■■■ 56.9
U2AF2P26368 DDX5-211ENST00000579091 531 ntTSL 47.6□□□□□ -1.194e-11■■■■■ 56.9
U2AF2P26368 DDX5-223ENST00000583212 543 ntTSL 45.79□□□□□ -1.484e-11■■■■■ 56.9
U2AF2P26368 FNBP4-213ENST00000534003 2515 ntTSL 519.73■□□□□ 0.755e-9■■■■■ 56.7
U2AF2P26368 GOLGA4-211ENST00000498250 560 ntTSL 22.73□□□□□ -1.975e-19■■■■■ 55.9
U2AF2P26368 FNBP4-210ENST00000531394 605 ntTSL 312.87□□□□□ -0.353e-8■■■■■ 55.9
U2AF2P26368 FNBP4-204ENST00000525792 840 ntTSL 39.51□□□□□ -0.892e-8■■■■■ 55.9
U2AF2P26368 FNBP4-208ENST00000529156 344 ntTSL 31.78□□□□□ -2.122e-9■■■■■ 55.9
U2AF2P26368 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.896e-13■■■■■ 55.7
U2AF2P26368 QSOX2-202ENST00000455222 851 ntTSL 57.48□□□□□ -1.216e-13■■■■■ 55.7
U2AF2P26368 TOX4-205ENST00000455393 2000 ntTSL 215.85■□□□□ 0.131e-14■■■■■ 54.9
U2AF2P26368 TOX4-203ENST00000448790 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.41e-14■■■■■ 54.9
U2AF2P26368 TOX4-212ENST00000613569 4711 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.761e-14■■■■■ 54.9
U2AF2P26368 ATXN2L-214ENST00000564284 603 ntTSL 217.42■□□□□ 0.389e-87■■■■■ 54.8
U2AF2P26368 EXOG-202ENST00000412107 1467 ntTSL 1 (best)30.12■■■□□ 2.416e-11■■■■■ 54.8
U2AF2P26368 EXOG-204ENST00000431472 1255 ntTSL 1 (best)25.75■■□□□ 1.716e-11■■■■■ 54.8
U2AF2P26368 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.6■■□□□ 1.536e-11■■■■■ 54.8
U2AF2P26368 EXOG-205ENST00000436414 1679 ntTSL 223.84■■□□□ 1.416e-11■■■■■ 54.8
U2AF2P26368 EXOG-212ENST00000457367 2075 ntTSL 1 (best)23.04■■□□□ 1.286e-11■■■■■ 54.8
U2AF2P26368 EXOG-208ENST00000447573 1750 ntTSL 221.94■■□□□ 1.16e-11■■■■■ 54.8
U2AF2P26368 EXOG-207ENST00000443942 576 ntTSL 421.72■■□□□ 1.076e-11■■■■■ 54.8
U2AF2P26368 EXOG-211ENST00000454803 1548 ntTSL 1 (best)21.53■■□□□ 1.046e-11■■■■■ 54.8
U2AF2P26368 EXOG-206ENST00000438992 1440 ntTSL 220.86■□□□□ 0.936e-11■■■■■ 54.8
U2AF2P26368 EXOG-216ENST00000489813 580 ntTSL 219.82■□□□□ 0.766e-11■■■■■ 54.8
U2AF2P26368 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.576e-11■■■■■ 54.8
U2AF2P26368 EXOG-214ENST00000474071 1799 ntTSL 215.16■□□□□ 0.026e-11■■■■■ 54.8
U2AF2P26368 EXOG-209ENST00000450732 710 ntTSL 314.78□□□□□ -0.046e-11■■■■■ 54.8
U2AF2P26368 EXOG-213ENST00000470291 455 ntTSL 59.88□□□□□ -0.836e-11■■■■■ 54.8
U2AF2P26368 EXOG-210ENST00000453767 576 ntTSL 42.32□□□□□ -2.046e-11■■■■■ 54.8
U2AF2P26368 DDB1-220ENST00000542337 558 ntTSL 322.43■■□□□ 1.185e-14■■■■■ 54.8
U2AF2P26368 DDB1-223ENST00000543658 571 ntTSL 413.57□□□□□ -0.245e-14■■■■■ 54.8
U2AF2P26368 DDB1-222ENST00000543627 540 ntTSL 512.37□□□□□ -0.435e-14■■■■■ 54.8
U2AF2P26368 DDB1-221ENST00000543162 575 ntTSL 412.26□□□□□ -0.455e-14■■■■■ 54.8
U2AF2P26368 DDB1-214ENST00000539426 805 ntTSL 311.93□□□□□ -0.55e-14■■■■■ 54.8
U2AF2P26368 DDB1-206ENST00000535283 1220 ntTSL 211.26□□□□□ -0.615e-14■■■■■ 54.8
U2AF2P26368 DDB1-208ENST00000537120 1215 ntTSL 29.25□□□□□ -0.935e-14■■■■■ 54.8
U2AF2P26368 DDB1-210ENST00000538129 475 ntTSL 26.7□□□□□ -1.345e-14■■■■■ 54.8
U2AF2P26368 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.05■■□□□ 1.67e-12■■■■■ 54.7
U2AF2P26368 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.597e-12■■■■■ 54.7
U2AF2P26368 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC14.99□□□□□ -0.015e-7■■■■■ 54.6
U2AF2P26368 CNOT4-203ENST00000361528 2215 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.135e-7■■■■■ 54.6
U2AF2P26368 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.635e-7■■■■■ 54.6
U2AF2P26368 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC9.44□□□□□ -0.95e-7■■■■■ 54.6
U2AF2P26368 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC9.37□□□□□ -0.915e-7■■■■■ 54.6
U2AF2P26368 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.035e-7■■■■■ 54.6
U2AF2P26368 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.42□□□□□ -1.225e-7■■■■■ 54.6
U2AF2P26368 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.48□□□□□ -1.695e-7■■■■■ 54.6
U2AF2P26368 MIR34A-201ENST00000385130 110 ntBASIC2.91□□□□□ -1.941e-323■■■■■ 54.5
U2AF2P26368 TCP11L2-207ENST00000551802 625 ntTSL 321.83■■□□□ 1.092e-12■■■■■ 53.8
U2AF2P26368 TCP11L2-204ENST00000548428 1067 ntTSL 311.43□□□□□ -0.582e-12■■■■■ 53.8
U2AF2P26368 TCP11L2-206ENST00000551228 544 ntTSL 1 (best)11.09□□□□□ -0.632e-12■■■■■ 53.8
U2AF2P26368 TCP11L2-205ENST00000549906 534 ntTSL 38.09□□□□□ -1.112e-12■■■■■ 53.8
U2AF2P26368 TCP11L2-210ENST00000553143 153 ntTSL 1 (best)7.69□□□□□ -1.182e-12■■■■■ 53.8
U2AF2P26368 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.066e-20■■■■■ 53.3
U2AF2P26368 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.336e-20■■■■■ 53.3
U2AF2P26368 RBMX-212ENST00000568578 4887 ntTSL 1 (best)10.94□□□□□ -0.665e-8■■■■■ 53.1
U2AF2P26368 RBMX-202ENST00000419968 940 ntTSL 510.35□□□□□ -0.755e-8■■■■■ 53.1
U2AF2P26368 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.59□□□□□ -1.355e-8■■■■■ 53.1
U2AF2P26368 PATJ-205ENST00000465798 569 ntTSL 213□□□□□ -0.335e-13■■■■■ 53
U2AF2P26368 PGM3-204ENST00000505470 561 ntTSL 412.96□□□□□ -0.335e-7■■■■■ 52.9
Retrieved 100 of 36,523 protein–RNA pairs in 93.4 ms