RNA–Protein interactions for RNA: ENST00000554097.1

ALKBH1-202, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

TSL 3

Gene ALKBH1, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-202ENST00000554097 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
ALKBH1-202ENST00000554097 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
ALKBH1-202ENST00000554097 SENP3Q9H4L4 574 aaPredicted RBP20.42■□□□□ 0.86
ALKBH1-202ENST00000554097 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
ALKBH1-202ENST00000554097 PLPPR3Q6T4P5 718 aa18.88■□□□□ 0.61
ALKBH1-202ENST00000554097 FOXD1Q16676 465 aa18.86■□□□□ 0.61
ALKBH1-202ENST00000554097 ADRA2BP18089 450 aa18.04■□□□□ 0.48
ALKBH1-202ENST00000554097 PPP6R1Q9UPN7 881 aa17.97■□□□□ 0.47
ALKBH1-202ENST00000554097 PIAS4Q8N2W9 510 aaPredicted RBP17.88■□□□□ 0.45
ALKBH1-202ENST00000554097 MSH5O43196 834 aa17.59■□□□□ 0.41
ALKBH1-202ENST00000554097 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
ALKBH1-202ENST00000554097 PPP4R3CPQ6ZMV5 832 aa16.58■□□□□ 0.24
ALKBH1-202ENST00000554097 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
ALKBH1-202ENST00000554097 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
ALKBH1-202ENST00000554097 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
ALKBH1-202ENST00000554097 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
ALKBH1-202ENST00000554097 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
ALKBH1-202ENST00000554097 KCNA4P22459 653 aa15.97■□□□□ 0.15
ALKBH1-202ENST00000554097 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
ALKBH1-202ENST00000554097 NPM3O75607 178 aaKnown RBP15.82■□□□□ 0.12
ALKBH1-202ENST00000554097 HOXD11P31277 338 aaPredicted RBP15.77■□□□□ 0.12
ALKBH1-202ENST00000554097 DCAF8L1A6NGE4 600 aa15.75■□□□□ 0.11
ALKBH1-202ENST00000554097 SLC4A1APQ9BWU0 796 aaKnown RBP15.29■□□□□ 0.04
ALKBH1-202ENST00000554097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.24■□□□□ 0.03
ALKBH1-202ENST00000554097 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
ALKBH1-202ENST00000554097 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
ALKBH1-202ENST00000554097 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
ALKBH1-202ENST00000554097 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
ALKBH1-202ENST00000554097 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
ALKBH1-202ENST00000554097 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
ALKBH1-202ENST00000554097 U3KPZ7 1027 aaPredicted RBP14.8□□□□□ -0.04
ALKBH1-202ENST00000554097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.74□□□□□ -0.05
ALKBH1-202ENST00000554097 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
ALKBH1-202ENST00000554097 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
ALKBH1-202ENST00000554097 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.05
ALKBH1-202ENST00000554097 APLP2Q06481 763 aa14.69□□□□□ -0.06
ALKBH1-202ENST00000554097 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
ALKBH1-202ENST00000554097 ZBTB22O15209 634 aa14.59□□□□□ -0.07
ALKBH1-202ENST00000554097 CAPN15O75808 1086 aa14.56□□□□□ -0.08
ALKBH1-202ENST00000554097 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
ALKBH1-202ENST00000554097 SPINK5Q9NQ38 1064 aaPredicted RBP14.45□□□□□ -0.1
ALKBH1-202ENST00000554097 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
ALKBH1-202ENST00000554097 ZNF219Q9P2Y4 722 aaPredicted RBP14.41□□□□□ -0.1
ALKBH1-202ENST00000554097 ATXN8OSP0DMR3 200 aa14.29□□□□□ -0.12
ALKBH1-202ENST00000554097 ABCB7O75027 752 aa14.21□□□□□ -0.13
ALKBH1-202ENST00000554097 DSG3P32926 999 aa14.18□□□□□ -0.14
ALKBH1-202ENST00000554097 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
ALKBH1-202ENST00000554097 POLA2Q14181 598 aa14.1□□□□□ -0.15
ALKBH1-202ENST00000554097 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
ALKBH1-202ENST00000554097 FBLN2P98095 1184 aa13.85□□□□□ -0.19
ALKBH1-202ENST00000554097 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
ALKBH1-202ENST00000554097 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
ALKBH1-202ENST00000554097 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
ALKBH1-202ENST00000554097 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
ALKBH1-202ENST00000554097 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
ALKBH1-202ENST00000554097 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
ALKBH1-202ENST00000554097 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
ALKBH1-202ENST00000554097 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
ALKBH1-202ENST00000554097 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
ALKBH1-202ENST00000554097 SSUH2Q9Y2M2 353 aa13.25□□□□□ -0.29
ALKBH1-202ENST00000554097 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
ALKBH1-202ENST00000554097 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
ALKBH1-202ENST00000554097 FKBP8Q14318 412 aa13.22□□□□□ -0.29
ALKBH1-202ENST00000554097 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
ALKBH1-202ENST00000554097 SPDYE1Q8NFV5 336 aaPredicted RBP13.16□□□□□ -0.3
ALKBH1-202ENST00000554097 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
ALKBH1-202ENST00000554097 PITPNM1O00562 1244 aa13.08□□□□□ -0.32
ALKBH1-202ENST00000554097 STAG3Q9UJ98 1225 aa13.04□□□□□ -0.32
ALKBH1-202ENST00000554097 PRR29P0C7W0 189 aa13□□□□□ -0.33
ALKBH1-202ENST00000554097 PROM2Q8N271 834 aa12.89□□□□□ -0.35
ALKBH1-202ENST00000554097 FBXO3Q9UK99 471 aa12.86□□□□□ -0.35
ALKBH1-202ENST00000554097 PIP4P2Q8N4L2 257 aa12.85□□□□□ -0.35
ALKBH1-202ENST00000554097 POTEHQ6S545 545 aa12.84□□□□□ -0.35
ALKBH1-202ENST00000554097 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
ALKBH1-202ENST00000554097 PRKAR2AP13861 404 aaKnown RBP12.82□□□□□ -0.36
ALKBH1-202ENST00000554097 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
ALKBH1-202ENST00000554097 CHADLQ6NUI6 762 aa12.75□□□□□ -0.37
ALKBH1-202ENST00000554097 MIER1Q8N108 512 aa12.74□□□□□ -0.37
ALKBH1-202ENST00000554097 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
ALKBH1-202ENST00000554097 CREBZFQ9NS37 354 aa12.64□□□□□ -0.39
ALKBH1-202ENST00000554097 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
ALKBH1-202ENST00000554097 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
ALKBH1-202ENST00000554097 HAX1O00165 279 aa12.61□□□□□ -0.39
ALKBH1-202ENST00000554097 ZBTB47Q9UFB7 747 aaPredicted RBP12.61□□□□□ -0.39
ALKBH1-202ENST00000554097 VASPP50552 380 aaPredicted RBP12.59□□□□□ -0.39
ALKBH1-202ENST00000554097 KLHL34Q8N239 644 aa12.57□□□□□ -0.4
ALKBH1-202ENST00000554097 PAK3O75914 559 aaPredicted RBP12.51□□□□□ -0.41
ALKBH1-202ENST00000554097 CD44P16070 742 aaKnown RBP12.46□□□□□ -0.41
ALKBH1-202ENST00000554097 C19orf67A6NJJ6 358 aa12.4□□□□□ -0.42
ALKBH1-202ENST00000554097 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
ALKBH1-202ENST00000554097 ZRANB1Q9UGI0 708 aa12.38□□□□□ -0.43
ALKBH1-202ENST00000554097 TSPYL2Q9H2G4 693 aaPredicted RBP12.37□□□□□ -0.43
ALKBH1-202ENST00000554097 FAM212AQ96EL1 285 aa12.34□□□□□ -0.43
ALKBH1-202ENST00000554097 IFNLR1Q8IU57 520 aaPredicted RBP12.33□□□□□ -0.44
ALKBH1-202ENST00000554097 SPOCK2Q92563 424 aa12.33□□□□□ -0.44
ALKBH1-202ENST00000554097 DCAF8Q5TAQ9 597 aa12.31□□□□□ -0.44
ALKBH1-202ENST00000554097 SP7Q8TDD2 431 aaPredicted RBP12.28□□□□□ -0.44
ALKBH1-202ENST00000554097 EVX2Q03828 476 aa12.27□□□□□ -0.45
ALKBH1-202ENST00000554097 RASEFQ8IZ41 740 aa12.27□□□□□ -0.45
ALKBH1-202ENST00000554097 NUBP1P53384 320 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 238.4 ms