RNA–Protein interactions for RNA: ENST00000587882.5

ATP6V0A1-216, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-216ENST00000587882 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
ATP6V0A1-216ENST00000587882 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
ATP6V0A1-216ENST00000587882 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
ATP6V0A1-216ENST00000587882 PHF23Q9BUL5 403 aaPredicted RBP20.08■□□□□ 0.81
ATP6V0A1-216ENST00000587882 FOXD1Q16676 465 aa19■□□□□ 0.63
ATP6V0A1-216ENST00000587882 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
ATP6V0A1-216ENST00000587882 MSH5O43196 834 aa17.85■□□□□ 0.45
ATP6V0A1-216ENST00000587882 PIAS4Q8N2W9 510 aaPredicted RBP17.77■□□□□ 0.44
ATP6V0A1-216ENST00000587882 PPP6R1Q9UPN7 881 aa17.65■□□□□ 0.42
ATP6V0A1-216ENST00000587882 ADRA2BP18089 450 aa17.62■□□□□ 0.41
ATP6V0A1-216ENST00000587882 POTEDQ86YR6 584 aa17.6■□□□□ 0.41
ATP6V0A1-216ENST00000587882 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
ATP6V0A1-216ENST00000587882 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
ATP6V0A1-216ENST00000587882 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
ATP6V0A1-216ENST00000587882 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
ATP6V0A1-216ENST00000587882 DCAF8L1A6NGE4 600 aa15.55■□□□□ 0.08
ATP6V0A1-216ENST00000587882 HOXD11P31277 338 aaPredicted RBP15.48■□□□□ 0.07
ATP6V0A1-216ENST00000587882 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
ATP6V0A1-216ENST00000587882 CACNB1Q02641 598 aaPredicted RBP15.4■□□□□ 0.06
ATP6V0A1-216ENST00000587882 RNF216Q9NWF9 866 aaPredicted RBP15.35■□□□□ 0.05
ATP6V0A1-216ENST00000587882 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
ATP6V0A1-216ENST00000587882 NCBP3Q53F19 620 aaKnown RBP15.12■□□□□ 0.01
ATP6V0A1-216ENST00000587882 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
ATP6V0A1-216ENST00000587882 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
ATP6V0A1-216ENST00000587882 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
ATP6V0A1-216ENST00000587882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.8□□□□□ -0.045e-8■■■■□ 22.1
ATP6V0A1-216ENST00000587882 KCNA4P22459 653 aa14.49□□□□□ -0.09
ATP6V0A1-216ENST00000587882 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
ATP6V0A1-216ENST00000587882 CAPN15O75808 1086 aa14.31□□□□□ -0.12
ATP6V0A1-216ENST00000587882 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
ATP6V0A1-216ENST00000587882 SLC4A2P04920 1241 aa14.22□□□□□ -0.13
ATP6V0A1-216ENST00000587882 DSG3P32926 999 aa14.2□□□□□ -0.14
ATP6V0A1-216ENST00000587882 APLP2Q06481 763 aa14.08□□□□□ -0.16
ATP6V0A1-216ENST00000587882 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
ATP6V0A1-216ENST00000587882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
ATP6V0A1-216ENST00000587882 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.17
ATP6V0A1-216ENST00000587882 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
ATP6V0A1-216ENST00000587882 ABCB7O75027 752 aa13.96□□□□□ -0.17
ATP6V0A1-216ENST00000587882 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
ATP6V0A1-216ENST00000587882 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
ATP6V0A1-216ENST00000587882 POTEHQ6S545 545 aa13.78□□□□□ -0.2
ATP6V0A1-216ENST00000587882 SLC4A1APQ9BWU0 796 aaKnown RBP13.68□□□□□ -0.22
ATP6V0A1-216ENST00000587882 POLA2Q14181 598 aa13.61□□□□□ -0.23
ATP6V0A1-216ENST00000587882 RBM42Q9BTD8 480 aaKnown RBP13.58□□□□□ -0.24
ATP6V0A1-216ENST00000587882 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
ATP6V0A1-216ENST00000587882 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
ATP6V0A1-216ENST00000587882 ZBTB12Q9Y330 459 aaPredicted RBP13.34□□□□□ -0.27
ATP6V0A1-216ENST00000587882 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
ATP6V0A1-216ENST00000587882 ZBTB22O15209 634 aa13.31□□□□□ -0.28
ATP6V0A1-216ENST00000587882 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
ATP6V0A1-216ENST00000587882 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
ATP6V0A1-216ENST00000587882 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
ATP6V0A1-216ENST00000587882 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
ATP6V0A1-216ENST00000587882 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
ATP6V0A1-216ENST00000587882 FBLN2P98095 1184 aa12.98□□□□□ -0.33
ATP6V0A1-216ENST00000587882 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
ATP6V0A1-216ENST00000587882 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
ATP6V0A1-216ENST00000587882 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
ATP6V0A1-216ENST00000587882 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
ATP6V0A1-216ENST00000587882 SP7Q8TDD2 431 aaPredicted RBP12.87□□□□□ -0.35
ATP6V0A1-216ENST00000587882 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
ATP6V0A1-216ENST00000587882 MKRN4PQ13434 485 aaPredicted RBP12.82□□□□□ -0.36
ATP6V0A1-216ENST00000587882 HAX1O00165 279 aa12.78□□□□□ -0.36
ATP6V0A1-216ENST00000587882 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
ATP6V0A1-216ENST00000587882 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
ATP6V0A1-216ENST00000587882 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
ATP6V0A1-216ENST00000587882 SSUH2Q9Y2M2 353 aa12.7□□□□□ -0.38
ATP6V0A1-216ENST00000587882 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
ATP6V0A1-216ENST00000587882 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
ATP6V0A1-216ENST00000587882 EVX2Q03828 476 aa12.57□□□□□ -0.4
ATP6V0A1-216ENST00000587882 PABPN1Q86U42 306 aaKnown RBP eCLIP12.55□□□□□ -0.4
ATP6V0A1-216ENST00000587882 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
ATP6V0A1-216ENST00000587882 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
ATP6V0A1-216ENST00000587882 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.41
ATP6V0A1-216ENST00000587882 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
ATP6V0A1-216ENST00000587882 GABBR2O75899 941 aa12.31□□□□□ -0.44
ATP6V0A1-216ENST00000587882 FARP1Q9Y4F1 1045 aaPredicted RBP12.27□□□□□ -0.45
ATP6V0A1-216ENST00000587882 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
ATP6V0A1-216ENST00000587882 SPDYE4A6NLX3 237 aa12.19□□□□□ -0.46
ATP6V0A1-216ENST00000587882 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
ATP6V0A1-216ENST00000587882 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
ATP6V0A1-216ENST00000587882 LHX8Q68G74 356 aa12.07□□□□□ -0.48
ATP6V0A1-216ENST00000587882 CLCN6P51797 869 aa12.06□□□□□ -0.48
ATP6V0A1-216ENST00000587882 ZRANB1Q9UGI0 708 aa12.06□□□□□ -0.48
ATP6V0A1-216ENST00000587882 ZNF579Q8NAF0 562 aaKnown RBP12.03□□□□□ -0.48
ATP6V0A1-216ENST00000587882 POTEIP0CG38 1075 aa12.02□□□□□ -0.49
ATP6V0A1-216ENST00000587882 DCBLD2Q96PD2 775 aa11.98□□□□□ -0.49
ATP6V0A1-216ENST00000587882 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
ATP6V0A1-216ENST00000587882 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
ATP6V0A1-216ENST00000587882 GALR2O43603 387 aaPredicted RBP11.9□□□□□ -0.5
ATP6V0A1-216ENST00000587882 MNX1P50219 401 aaPredicted RBP11.88□□□□□ -0.51
ATP6V0A1-216ENST00000587882 PHF12Q96QT6 1004 aa11.88□□□□□ -0.51
ATP6V0A1-216ENST00000587882 PROM2Q8N271 834 aa11.83□□□□□ -0.52
ATP6V0A1-216ENST00000587882 MS4A3Q96HJ5 214 aa11.71□□□□□ -0.53
ATP6V0A1-216ENST00000587882 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
ATP6V0A1-216ENST00000587882 PLEKHG5O94827 1062 aa11.67□□□□□ -0.54
ATP6V0A1-216ENST00000587882 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.54
ATP6V0A1-216ENST00000587882 MIER1Q8N108 512 aa11.64□□□□□ -0.55
ATP6V0A1-216ENST00000587882 CCDC61Q9Y6R9 512 aa11.64□□□□□ -0.55
ATP6V0A1-216ENST00000587882 POTEB2H3BUK9 544 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms