Protein–RNA interactions for Protein: P09007

SRD1, Pre-rRNA-processing protein SRD1, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRD1P09007 YLR154C-GYLR154C-G 150 nt13.61□□□□□ -0.23
SRD1P09007 SIS1YNL007C 1059 nt13.58□□□□□ -0.24
SRD1P09007 MEP2YNL142W 1500 nt13.58□□□□□ -0.24
SRD1P09007 RPP2AYOL039W 321 nt13.51□□□□□ -0.25
SRD1P09007 YJL152WYJL152W 360 nt13.48□□□□□ -0.25
SRD1P09007 DSK2YMR276W 1122 nt13.45□□□□□ -0.26
SRD1P09007 PTP1YDL230W 1008 nt13.44□□□□□ -0.26
SRD1P09007 MOT3YMR070W 1473 nt13.42□□□□□ -0.26
SRD1P09007 IMP2'YIL154C 1041 nt13.41□□□□□ -0.26
SRD1P09007 TIR4YOR009W 1464 nt13.41□□□□□ -0.26
SRD1P09007 YLR236CYLR236C 324 nt13.4□□□□□ -0.26
SRD1P09007 YPR011CYPR011C 981 nt13.4□□□□□ -0.26
SRD1P09007 DCW1YKL046C 1350 nt13.39□□□□□ -0.27
SRD1P09007 YCH1YGR203W 447 nt13.38□□□□□ -0.27
SRD1P09007 ART5YGR068C 1761 nt13.36□□□□□ -0.27
SRD1P09007 FMP45YDL222C 930 nt13.35□□□□□ -0.27
SRD1P09007 CAC2YML102W 1407 nt13.3□□□□□ -0.28
SRD1P09007 PET9YBL030C 957 nt13.29□□□□□ -0.28
SRD1P09007 GFD2YCL036W 1701 nt13.29□□□□□ -0.28
SRD1P09007 IDH1YNL037C 1083 nt13.27□□□□□ -0.29
SRD1P09007 YMR057CYMR057C 372 nt13.25□□□□□ -0.29
SRD1P09007 EMI2YDR516C 1503 nt13.23□□□□□ -0.29
SRD1P09007 LPX1YOR084W 1164 nt13.16□□□□□ -0.3
SRD1P09007 GBP2YCL011C 1284 nt13.15□□□□□ -0.3
SRD1P09007 YCL048W-AYCL048W-A 240 nt13.15□□□□□ -0.3
SRD1P09007 ERV46YAL042W 1248 nt13.14□□□□□ -0.31
SRD1P09007 YDL221WYDL221W 552 nt13.13□□□□□ -0.31
SRD1P09007 YDR433WYDR433W 441 nt13.13□□□□□ -0.31
SRD1P09007 RTS2YOR077W 699 nt13.13□□□□□ -0.31
SRD1P09007 YMR090WYMR090W 684 nt13.11□□□□□ -0.31
SRD1P09007 SSA4YER103W 1929 nt13.11□□□□□ -0.31
SRD1P09007 IRC15YPL017C 1500 nt13.1□□□□□ -0.31
SRD1P09007 FPS1YLL043W 2010 nt13.04□□□□□ -0.32
SRD1P09007 YKR040CYKR040C 504 nt13.03□□□□□ -0.32
SRD1P09007 MXR2YCL033C 507 nt13.03□□□□□ -0.32
SRD1P09007 CUE1YMR264W 612 nt13□□□□□ -0.33
SRD1P09007 GIS3YLR094C 1509 nt12.99□□□□□ -0.33
SRD1P09007 TCD2YKL027W 1344 nt12.98□□□□□ -0.33
SRD1P09007 SPP1YPL138C 1062 nt12.96□□□□□ -0.33
SRD1P09007 SDH1YKL148C 1923 nt12.94□□□□□ -0.34
SRD1P09007 RRD1YIL153W 1182 nt12.91□□□□□ -0.34
SRD1P09007 YBR220CYBR220C 1683 nt12.9□□□□□ -0.34
SRD1P09007 DED1YOR204W 1815 nt12.9□□□□□ -0.34
SRD1P09007 SCC4YER147C 1875 nt12.89□□□□□ -0.35
SRD1P09007 YIL100WYIL100W 354 nt12.85□□□□□ -0.35
SRD1P09007 MRPL8YJL063C 717 nt12.8□□□□□ -0.36
SRD1P09007 FRD1YEL047C 1413 nt12.78□□□□□ -0.36
SRD1P09007 FMT1YBL013W 1206 nt12.77□□□□□ -0.37
SRD1P09007 RTG1YOL067C 534 nt12.74□□□□□ -0.37
SRD1P09007 YCL042WYCL042W 360 nt12.73□□□□□ -0.37
SRD1P09007 SOR2YDL246C 1074 nt12.71□□□□□ -0.37
SRD1P09007 FMP52YER004W 696 nt12.71□□□□□ -0.37
SRD1P09007 SOR1YJR159W 1074 nt12.71□□□□□ -0.37
SRD1P09007 YEL076C-AYEL076C-A 651 nt12.7□□□□□ -0.38
SRD1P09007 YEL076CYEL076C 651 nt12.7□□□□□ -0.38
SRD1P09007 YLR464WYLR464W 651 nt12.7□□□□□ -0.38
SRD1P09007 ADO1YJR105W 1023 nt12.67□□□□□ -0.38
SRD1P09007 CWP1YKL096W 720 nt12.64□□□□□ -0.39
SRD1P09007 YNL195CYNL195C 786 nt12.62□□□□□ -0.39
SRD1P09007 PTH1YHR189W 573 nt12.61□□□□□ -0.39
SRD1P09007 ADH2YMR303C 1047 nt12.61□□□□□ -0.39
SRD1P09007 RRT12YCR045C 1476 nt12.56□□□□□ -0.4
SRD1P09007 YSC84YHR016C 1407 nt12.55□□□□□ -0.4
SRD1P09007 YLR235CYLR235C 399 nt12.55□□□□□ -0.4
SRD1P09007 BDF1YLR399C 2061 nt12.55□□□□□ -0.4
SRD1P09007 PCM1YEL058W 1674 nt12.54□□□□□ -0.4
SRD1P09007 HUA1YGR268C 597 nt12.51□□□□□ -0.41
SRD1P09007 SNF6YHL025W 999 nt12.51□□□□□ -0.41
SRD1P09007 YKL030WYKL030W 606 nt12.5□□□□□ -0.41
SRD1P09007 YHL050CYHL050C 2094 nt12.49□□□□□ -0.41
SRD1P09007 LCB1YMR296C 1677 nt12.45□□□□□ -0.42
SRD1P09007 DIC1YLR348C 897 nt12.43□□□□□ -0.42
SRD1P09007 SEC11YIR022W 504 nt12.42□□□□□ -0.42
SRD1P09007 TAT1YBR069C 1860 nt12.4□□□□□ -0.42
SRD1P09007 YIH1YCR059C 777 nt12.39□□□□□ -0.43
SRD1P09007 RNQ1YCL028W 1218 nt12.38□□□□□ -0.43
SRD1P09007 TIM23YNR017W 669 nt12.37□□□□□ -0.43
SRD1P09007 UBX6YJL048C 1191 nt12.33□□□□□ -0.44
SRD1P09007 SIM1YIL123W 1431 nt12.32□□□□□ -0.44
SRD1P09007 BIO4YNR057C 714 nt12.31□□□□□ -0.44
SRD1P09007 PCH2YBR186W 1695 nt12.3□□□□□ -0.44
SRD1P09007 YLR179CYLR179C 606 nt12.3□□□□□ -0.44
SRD1P09007 YLL053CYLL053C 459 nt12.28□□□□□ -0.44
SRD1P09007 YDR094WYDR094W 336 nt12.23□□□□□ -0.45
SRD1P09007 GUT2YIL155C 1950 nt12.22□□□□□ -0.45
SRD1P09007 YPR064WYPR064W 420 nt12.2□□□□□ -0.46
SRD1P09007 FTR1YER145C 1215 nt12.19□□□□□ -0.46
SRD1P09007 tL(GAG)GtL(GAG)G 82 nt12.19□□□□□ -0.46
SRD1P09007 WSC2YNL283C 1512 nt12.18□□□□□ -0.46
SRD1P09007 AHT1YHR093W 549 nt12.17□□□□□ -0.46
SRD1P09007 GAL1YBR020W 1587 nt12.16□□□□□ -0.46
SRD1P09007 AQY1YPR192W 918 nt12.15□□□□□ -0.46
SRD1P09007 TAD3YLR316C 969 nt12.14□□□□□ -0.47
SRD1P09007 NCP1YHR042W 2076 nt12.12□□□□□ -0.47
SRD1P09007 TRM5YHR070W 1500 nt12.12□□□□□ -0.47
SRD1P09007 ERF2YLR246W 1080 nt12.11□□□□□ -0.47
SRD1P09007 BOP3YNL042W 1191 nt12.09□□□□□ -0.47
SRD1P09007 ATF2YGR177C 1608 nt12.08□□□□□ -0.48
SRD1P09007 RTF1YGL244W 1677 nt12.07□□□□□ -0.48
SRD1P09007 CRR1YLR213C 1269 nt12.05□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms