Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 YMR090WYMR090W 684 nt12.72□□□□□ -0.37
RAD3P06839 FUN26YAL022C 1554 nt12.69□□□□□ -0.38
RAD3P06839 YDL221WYDL221W 552 nt12.69□□□□□ -0.38
RAD3P06839 PTP1YDL230W 1008 nt12.68□□□□□ -0.38
RAD3P06839 CAC2YML102W 1407 nt12.68□□□□□ -0.38
RAD3P06839 PCH2YBR186W 1695 nt12.67□□□□□ -0.38
RAD3P06839 YLR281CYLR281C 468 nt12.66□□□□□ -0.38
RAD3P06839 GUT2YIL155C 1950 nt12.65□□□□□ -0.38
RAD3P06839 SDH1YKL148C 1923 nt12.64□□□□□ -0.39
RAD3P06839 RPP2AYOL039W 321 nt12.61□□□□□ -0.39
RAD3P06839 ALF1YNL148C 765 nt12.6□□□□□ -0.39
RAD3P06839 PUS2YGL063W 1113 nt12.59□□□□□ -0.39
RAD3P06839 WHI5YOR083W 888 nt12.54□□□□□ -0.4
RAD3P06839 TRM9YML014W 840 nt12.53□□□□□ -0.4
RAD3P06839 SEC11YIR022W 504 nt12.52□□□□□ -0.41
RAD3P06839 IRC15YPL017C 1500 nt12.49□□□□□ -0.41
RAD3P06839 SCC4YER147C 1875 nt12.48□□□□□ -0.41
RAD3P06839 CCT6YDR188W 1641 nt12.47□□□□□ -0.41
RAD3P06839 MOT3YMR070W 1473 nt12.46□□□□□ -0.41
RAD3P06839 UME6YDR207C 2511 nt12.46□□□□□ -0.42
RAD3P06839 SIS1YNL007C 1059 nt12.45□□□□□ -0.42
RAD3P06839 GIS3YLR094C 1509 nt12.41□□□□□ -0.42
RAD3P06839 PIB2YGL023C 1908 nt12.41□□□□□ -0.42
RAD3P06839 SUF2tP(AGG)C 72 nt12.36□□□□□ -0.43
RAD3P06839 SUF10tP(AGG)N 72 nt12.36□□□□□ -0.43
RAD3P06839 IMP2'YIL154C 1041 nt12.36□□□□□ -0.43
RAD3P06839 GFD2YCL036W 1701 nt12.34□□□□□ -0.43
RAD3P06839 DSK2YMR276W 1122 nt12.33□□□□□ -0.44
RAD3P06839 ART5YGR068C 1761 nt12.33□□□□□ -0.44
RAD3P06839 YLR154C-GYLR154C-G 150 nt12.3□□□□□ -0.44
RAD3P06839 BOR1YNL275W 1731 nt12.28□□□□□ -0.44
RAD3P06839 RTS2YOR077W 699 nt12.28□□□□□ -0.44
RAD3P06839 YPR011CYPR011C 981 nt12.28□□□□□ -0.44
RAD3P06839 YSC84YHR016C 1407 nt12.27□□□□□ -0.45
RAD3P06839 FMP45YDL222C 930 nt12.26□□□□□ -0.45
RAD3P06839 YLR236CYLR236C 324 nt12.24□□□□□ -0.45
RAD3P06839 RTF1YGL244W 1677 nt12.23□□□□□ -0.45
RAD3P06839 YCH1YGR203W 447 nt12.21□□□□□ -0.45
RAD3P06839 YHL050CYHL050C 2094 nt12.21□□□□□ -0.45
RAD3P06839 MRPL8YJL063C 717 nt12.2□□□□□ -0.46
RAD3P06839 PET9YBL030C 957 nt12.2□□□□□ -0.46
RAD3P06839 CUE1YMR264W 612 nt12.14□□□□□ -0.47
RAD3P06839 RRT12YCR045C 1476 nt12.11□□□□□ -0.47
RAD3P06839 TIR4YOR009W 1464 nt12.11□□□□□ -0.47
RAD3P06839 ERV46YAL042W 1248 nt12.07□□□□□ -0.48
RAD3P06839 PTK1YKL198C 1989 nt12.07□□□□□ -0.48
RAD3P06839 BOP3YNL042W 1191 nt12.05□□□□□ -0.48
RAD3P06839 MCH5YOR306C 1566 nt12.02□□□□□ -0.49
RAD3P06839 YJL152WYJL152W 360 nt12.02□□□□□ -0.49
RAD3P06839 IDH1YNL037C 1083 nt12.02□□□□□ -0.49
RAD3P06839 YMR057CYMR057C 372 nt12.01□□□□□ -0.49
RAD3P06839 LPX1YOR084W 1164 nt11.99□□□□□ -0.49
RAD3P06839 YNL195CYNL195C 786 nt11.98□□□□□ -0.49
RAD3P06839 ADO1YJR105W 1023 nt11.97□□□□□ -0.49
RAD3P06839 YIL100WYIL100W 354 nt11.96□□□□□ -0.49
RAD3P06839 YEL076C-AYEL076C-A 651 nt11.92□□□□□ -0.5
RAD3P06839 YEL076CYEL076C 651 nt11.92□□□□□ -0.5
RAD3P06839 YLR464WYLR464W 651 nt11.92□□□□□ -0.5
RAD3P06839 YKR040CYKR040C 504 nt11.91□□□□□ -0.5
RAD3P06839 YDR433WYDR433W 441 nt11.87□□□□□ -0.51
RAD3P06839 RTG1YOL067C 534 nt11.87□□□□□ -0.51
RAD3P06839 SPP1YPL138C 1062 nt11.87□□□□□ -0.51
RAD3P06839 NCP1YHR042W 2076 nt11.84□□□□□ -0.51
RAD3P06839 GBP2YCL011C 1284 nt11.83□□□□□ -0.52
RAD3P06839 ALG12YNR030W 1656 nt11.8□□□□□ -0.52
RAD3P06839 YFL054CYFL054C 1941 nt11.8□□□□□ -0.52
RAD3P06839 SPT8YLR055C 1809 nt11.75□□□□□ -0.53
RAD3P06839 MXR2YCL033C 507 nt11.73□□□□□ -0.53
RAD3P06839 YCL048W-AYCL048W-A 240 nt11.73□□□□□ -0.53
RAD3P06839 HSP60YLR259C 1719 nt11.72□□□□□ -0.53
RAD3P06839 UBX6YJL048C 1191 nt11.71□□□□□ -0.53
RAD3P06839 TCD2YKL027W 1344 nt11.67□□□□□ -0.54
RAD3P06839 LCB1YMR296C 1677 nt11.65□□□□□ -0.54
RAD3P06839 HUA1YGR268C 597 nt11.64□□□□□ -0.55
RAD3P06839 FRD1YEL047C 1413 nt11.58□□□□□ -0.56
RAD3P06839 DED1YOR204W 1815 nt11.58□□□□□ -0.56
RAD3P06839 YDR094WYDR094W 336 nt11.56□□□□□ -0.56
RAD3P06839 RRD1YIL153W 1182 nt11.56□□□□□ -0.56
RAD3P06839 SOR2YDL246C 1074 nt11.49□□□□□ -0.57
RAD3P06839 SOR1YJR159W 1074 nt11.49□□□□□ -0.57
RAD3P06839 GLK1YCL040W 1503 nt11.48□□□□□ -0.57
RAD3P06839 NAR1YNL240C 1476 nt11.47□□□□□ -0.57
RAD3P06839 SWE1YJL187C 2460 nt11.45□□□□□ -0.58
RAD3P06839 YLR235CYLR235C 399 nt11.45□□□□□ -0.58
RAD3P06839 YKL030WYKL030W 606 nt11.44□□□□□ -0.58
RAD3P06839 YCL042WYCL042W 360 nt11.44□□□□□ -0.58
RAD3P06839 FMT1YBL013W 1206 nt11.43□□□□□ -0.58
RAD3P06839 LYS4YDR234W 2082 nt11.42□□□□□ -0.58
RAD3P06839 SIM1YIL123W 1431 nt11.42□□□□□ -0.58
RAD3P06839 FMP52YER004W 696 nt11.41□□□□□ -0.58
RAD3P06839 YFL015W-AYFL015W-A 318 nt11.41□□□□□ -0.58
RAD3P06839 PCM1YEL058W 1674 nt11.4□□□□□ -0.58
RAD3P06839 PTH1YHR189W 573 nt11.38□□□□□ -0.59
RAD3P06839 YJL225CYJL225C 5277 nt11.34□□□□□ -0.59
RAD3P06839 BIO4YNR057C 714 nt11.31□□□□□ -0.6
RAD3P06839 ADH2YMR303C 1047 nt11.29□□□□□ -0.6
RAD3P06839 SNF6YHL025W 999 nt11.25□□□□□ -0.61
RAD3P06839 CWP1YKL096W 720 nt11.25□□□□□ -0.61
RAD3P06839 AAC1YMR056C 930 nt11.24□□□□□ -0.61
RAD3P06839 FUR4YBR021W 1902 nt11.21□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms