Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.85■□□□□ 0.29
TLR9Q9NR96 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.85■□□□□ 0.29
TLR9Q9NR96 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 HLA-A-202ENST00000376806 1854 ntBASIC16.85■□□□□ 0.29
TLR9Q9NR96 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.85■□□□□ 0.29
TLR9Q9NR96 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.85■□□□□ 0.29
TLR9Q9NR96 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.85■□□□□ 0.29
TLR9Q9NR96 KRT18P64-201ENST00000434946 1219 ntBASIC16.85■□□□□ 0.29
TLR9Q9NR96 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.85■□□□□ 0.29
TLR9Q9NR96 YBX1P6-201ENST00000442962 1002 ntBASIC16.85■□□□□ 0.29
TLR9Q9NR96 AC099548.2-209ENST00000480264 625 ntBASIC16.85■□□□□ 0.29
TLR9Q9NR96 FTH1P14-201ENST00000482930 551 ntBASIC16.85■□□□□ 0.29
TLR9Q9NR96 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.85■□□□□ 0.29
TLR9Q9NR96 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.85■□□□□ 0.29
TLR9Q9NR96 AC079316.1-201ENST00000548397 411 ntBASIC16.85■□□□□ 0.29
TLR9Q9NR96 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.85■□□□□ 0.29
TLR9Q9NR96 CLUHP6-201ENST00000580789 941 ntBASIC16.85■□□□□ 0.29
TLR9Q9NR96 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.85■□□□□ 0.29
TLR9Q9NR96 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.85■□□□□ 0.29
TLR9Q9NR96 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TLR9Q9NR96 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.85■□□□□ 0.29
TLR9Q9NR96 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TLR9Q9NR96 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 AC092171.3-201ENST00000610122 2651 ntBASIC16.84■□□□□ 0.29
TLR9Q9NR96 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 AC016694.1-201ENST00000434179 700 ntBASIC16.84■□□□□ 0.29
TLR9Q9NR96 AC012441.1-201ENST00000446669 685 ntBASIC16.84■□□□□ 0.29
TLR9Q9NR96 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 VDAC1P7-201ENST00000462417 847 ntBASIC16.84■□□□□ 0.29
TLR9Q9NR96 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.84■□□□□ 0.29
TLR9Q9NR96 AC010328.2-201ENST00000597698 1111 ntBASIC16.84■□□□□ 0.29
TLR9Q9NR96 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 AC134312.5-201ENST00000568031 1313 ntBASIC16.84■□□□□ 0.29
TLR9Q9NR96 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.84■□□□□ 0.29
TLR9Q9NR96 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TLR9Q9NR96 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TLR9Q9NR96 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TLR9Q9NR96 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TLR9Q9NR96 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TLR9Q9NR96 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TLR9Q9NR96 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
TLR9Q9NR96 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TLR9Q9NR96 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TLR9Q9NR96 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TLR9Q9NR96 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms