Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 AC005622.1-201ENST00000636801 1703 ntBASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NECTIN3Q9NQS3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
NECTIN3Q9NQS3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
NECTIN3Q9NQS3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 HLA-J-203ENST00000494367 1087 ntBASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 LINC00628-201ENST00000628516 1289 ntBASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
NECTIN3Q9NQS3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 TNRC18P2-201ENST00000417666 2714 ntBASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NECTIN3Q9NQS3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms