Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 METTL21AP1-201ENST00000438852 635 ntBASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 MIR3197-201ENST00000582241 73 ntBASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 AC092902.6-201ENST00000641783 218 ntBASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 HLA-H-201ENST00000383620 1096 ntBASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 MIR600HG-201ENST00000449175 5984 ntBASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 TSPY26P-202ENST00000565928 3884 ntBASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.13■□□□□ 0.01
NEUROD4Q9HD90 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 AP003680.1-201ENST00000598970 3660 ntBASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 AC126177.1-201ENST00000547829 2218 ntBASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms