Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM6Q9C030 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
TRIM6Q9C030 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM6Q9C030 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM6Q9C030 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM6Q9C030 KRT8P12-202ENST00000472924 1397 ntBASIC17.61■□□□□ 0.41
TRIM6Q9C030 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM6Q9C030 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
TRIM6Q9C030 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM6Q9C030 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM6Q9C030 AL592424.1-201ENST00000563624 1536 ntBASIC17.61■□□□□ 0.41
TRIM6Q9C030 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM6Q9C030 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM6Q9C030 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM6Q9C030 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM6Q9C030 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRIM6Q9C030 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.6■□□□□ 0.41
TRIM6Q9C030 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.6■□□□□ 0.41
TRIM6Q9C030 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.6■□□□□ 0.41
TRIM6Q9C030 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM6Q9C030 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM6Q9C030 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM6Q9C030 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
TRIM6Q9C030 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM6Q9C030 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM6Q9C030 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM6Q9C030 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM6Q9C030 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRIM6Q9C030 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.59■□□□□ 0.41
TRIM6Q9C030 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 SPDYE17-201ENST00000412399 783 ntBASIC17.59■□□□□ 0.41
TRIM6Q9C030 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 AC135586.1-201ENST00000539323 574 ntBASIC17.59■□□□□ 0.41
TRIM6Q9C030 AC009407.1-201ENST00000568958 598 ntBASIC17.59■□□□□ 0.41
TRIM6Q9C030 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 AC008738.7-201ENST00000609744 511 ntBASIC17.59■□□□□ 0.41
TRIM6Q9C030 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 MIR6069-201ENST00000620069 79 ntBASIC17.59■□□□□ 0.41
TRIM6Q9C030 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 AGGF1P2-201ENST00000426656 2106 ntBASIC17.59■□□□□ 0.41
TRIM6Q9C030 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM6Q9C030 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM6Q9C030 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
TRIM6Q9C030 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM6Q9C030 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.58■□□□□ 0.41
TRIM6Q9C030 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.58■□□□□ 0.41
TRIM6Q9C030 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM6Q9C030 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM6Q9C030 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRIM6Q9C030 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM6Q9C030 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TRIM6Q9C030 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM6Q9C030 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM6Q9C030 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
TRIM6Q9C030 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms