Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 BNIP3P1-202ENST00000550043 1585 ntBASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 ALG1L5P-201ENST00000482043 771 ntBASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 AC079140.1-201ENST00000508039 487 ntBASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 LINC01225-203ENST00000563550 1244 ntBASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.1■□□□□ 0.65
UPF3BQ9BZI7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 AL691432.1-201ENST00000596308 1422 ntBASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 AL136982.4-201ENST00000437689 1740 ntBASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 AP000842.3-202ENST00000569238 1080 ntBASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPF3BQ9BZI7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.08■□□□□ 0.65
UPF3BQ9BZI7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms