Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM62Q9BVG3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 AC025048.3-201ENST00000590609 569 ntBASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 AC005702.4-201ENST00000618393 416 ntBASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM62Q9BVG3 AC068587.6-202ENST00000641839 5619 ntBASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 AL096865.1-201ENST00000606796 927 ntBASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM62Q9BVG3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM62Q9BVG3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM62Q9BVG3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM62Q9BVG3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM62Q9BVG3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM62Q9BVG3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM62Q9BVG3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM62Q9BVG3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRIM62Q9BVG3 AC022188.1-201ENST00000620960 1664 ntBASIC16.6■□□□□ 0.25
TRIM62Q9BVG3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM62Q9BVG3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.6■□□□□ 0.25
TRIM62Q9BVG3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM62Q9BVG3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms