Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN18Q99952 AL023775.1-201ENST00000454907 1746 ntBASIC18.04■□□□□ 0.48
PTPN18Q99952 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
PTPN18Q99952 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN18Q99952 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN18Q99952 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN18Q99952 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN18Q99952 MIR33B-201ENST00000385104 96 ntBASIC18.04■□□□□ 0.48
PTPN18Q99952 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PTPN18Q99952 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN18Q99952 NKAIN1P1-201ENST00000435754 582 ntBASIC18.04■□□□□ 0.48
PTPN18Q99952 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN18Q99952 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN18Q99952 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN18Q99952 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN18Q99952 TMEM198B-204ENST00000484016 896 ntBASIC18.04■□□□□ 0.48
PTPN18Q99952 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN18Q99952 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN18Q99952 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN18Q99952 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.04■□□□□ 0.48
PTPN18Q99952 AC091812.3-201ENST00000621362 345 ntBASIC18.04■□□□□ 0.48
PTPN18Q99952 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN18Q99952 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN18Q99952 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN18Q99952 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN18Q99952 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN18Q99952 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PTPN18Q99952 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTPN18Q99952 AC005052.1-201ENST00000625181 2492 ntBASIC18.04■□□□□ 0.48
PTPN18Q99952 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
PTPN18Q99952 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN18Q99952 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 AL133267.1-201ENST00000398220 340 ntBASIC18.03■□□□□ 0.48
PTPN18Q99952 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN18Q99952 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.03■□□□□ 0.48
PTPN18Q99952 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN18Q99952 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN18Q99952 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.03■□□□□ 0.48
PTPN18Q99952 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN18Q99952 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN18Q99952 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PTPN18Q99952 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PTPN18Q99952 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN18Q99952 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.02■□□□□ 0.48
PTPN18Q99952 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN18Q99952 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN18Q99952 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
PTPN18Q99952 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN18Q99952 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.02■□□□□ 0.48
PTPN18Q99952 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN18Q99952 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.02■□□□□ 0.48
PTPN18Q99952 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.02■□□□□ 0.48
PTPN18Q99952 AC044849.1-201ENST00000519737 1188 ntBASIC18.02■□□□□ 0.48
PTPN18Q99952 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.02■□□□□ 0.48
PTPN18Q99952 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.02■□□□□ 0.48
PTPN18Q99952 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.02■□□□□ 0.48
PTPN18Q99952 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN18Q99952 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.02■□□□□ 0.48
PTPN18Q99952 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN18Q99952 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN18Q99952 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN18Q99952 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.02■□□□□ 0.47
PTPN18Q99952 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN18Q99952 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN18Q99952 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.02■□□□□ 0.47
PTPN18Q99952 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.02■□□□□ 0.47
PTPN18Q99952 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN18Q99952 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN18Q99952 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN18Q99952 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.01■□□□□ 0.47
PTPN18Q99952 AC092978.1-202ENST00000637590 1327 ntBASIC18.01■□□□□ 0.47
PTPN18Q99952 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.01■□□□□ 0.47
PTPN18Q99952 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN18Q99952 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PTPN18Q99952 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms