Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 AC138894.3-201ENST00000603787 634 ntBASIC13.03□□□□□ -0.32
RAB40CQ96S21 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 C18orf15-201ENST00000623680 2534 ntBASIC13.03□□□□□ -0.32
RAB40CQ96S21 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 AP001282.1-201ENST00000531301 1499 ntBASIC13.03□□□□□ -0.32
RAB40CQ96S21 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB40CQ96S21 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB40CQ96S21 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
RAB40CQ96S21 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
RAB40CQ96S21 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB40CQ96S21 GRK6P1-201ENST00000400595 1711 ntBASIC13.02□□□□□ -0.32
RAB40CQ96S21 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RAB40CQ96S21 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB40CQ96S21 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
RAB40CQ96S21 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB40CQ96S21 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
RAB40CQ96S21 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
RAB40CQ96S21 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB40CQ96S21 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RAB40CQ96S21 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.02□□□□□ -0.32
RAB40CQ96S21 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RAB40CQ96S21 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.02□□□□□ -0.32
RAB40CQ96S21 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 FOSL1P1-201ENST00000511041 816 ntBASIC13.02□□□□□ -0.33
RAB40CQ96S21 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 AC023908.3-201ENST00000564211 3047 ntBASIC13.02□□□□□ -0.33
RAB40CQ96S21 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 AC026748.1-201ENST00000624349 3251 ntBASIC13.02□□□□□ -0.33
RAB40CQ96S21 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 MROH4P-201ENST00000431302 1578 ntBASIC13.02□□□□□ -0.33
RAB40CQ96S21 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB40CQ96S21 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB40CQ96S21 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAB40CQ96S21 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.01□□□□□ -0.33
RAB40CQ96S21 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms