Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.27□□□□□ -0.29
GAFA1Q96PS6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 RN7SL618P-201ENST00000477850 296 ntBASIC13.27□□□□□ -0.29
GAFA1Q96PS6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 AL512361.1-201ENST00000554200 418 ntBASIC13.27□□□□□ -0.29
GAFA1Q96PS6 AL390955.2-201ENST00000603032 514 ntBASIC13.27□□□□□ -0.29
GAFA1Q96PS6 AC138649.4-201ENST00000612222 287 ntBASIC13.27□□□□□ -0.29
GAFA1Q96PS6 AL390754.1-201ENST00000619088 582 ntBASIC13.27□□□□□ -0.29
GAFA1Q96PS6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 AC100757.3-201ENST00000622361 1406 ntBASIC13.27□□□□□ -0.29
GAFA1Q96PS6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 AC010336.2-201ENST00000564226 506 ntBASIC13.26□□□□□ -0.29
GAFA1Q96PS6 AC027796.2-201ENST00000575326 344 ntBASIC13.26□□□□□ -0.29
GAFA1Q96PS6 MIR4313-201ENST00000580760 101 ntBASIC13.26□□□□□ -0.29
GAFA1Q96PS6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 AC097359.3-201ENST00000603982 1210 ntBASIC13.26□□□□□ -0.29
GAFA1Q96PS6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 AL590560.3-201ENST00000623350 461 ntBASIC13.26□□□□□ -0.29
GAFA1Q96PS6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GAFA1Q96PS6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms