Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 AC015936.2-201ENST00000593177 259 ntBASIC18.68■□□□□ 0.58
TRIM47Q96LD4 MIR8072-201ENST00000614241 80 ntBASIC18.68■□□□□ 0.58
TRIM47Q96LD4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 KRT8P44-201ENST00000441609 1350 ntBASIC18.68■□□□□ 0.58
TRIM47Q96LD4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 MIR1908-201ENST00000410394 80 ntBASIC18.67■□□□□ 0.58
TRIM47Q96LD4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 RN7SL219P-201ENST00000582872 296 ntBASIC18.67■□□□□ 0.58
TRIM47Q96LD4 MIR6869-201ENST00000619434 62 ntBASIC18.67■□□□□ 0.58
TRIM47Q96LD4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRIM47Q96LD4 AC092364.2-201ENST00000596710 2692 ntBASIC18.67■□□□□ 0.58
TRIM47Q96LD4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 CDC14C-201ENST00000428251 1719 ntBASIC18.66■□□□□ 0.58
TRIM47Q96LD4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 AL583810.1-201ENST00000553344 1045 ntBASIC18.66■□□□□ 0.58
TRIM47Q96LD4 AC061975.2-201ENST00000581722 295 ntBASIC18.66■□□□□ 0.58
TRIM47Q96LD4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 BTNL10-201ENST00000595971 695 ntBASIC18.66■□□□□ 0.58
TRIM47Q96LD4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 RPSAP52-203ENST00000622976 1023 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms