Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RNF31Q96EP0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF31Q96EP0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.48■□□□□ 0.07
RNF31Q96EP0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 AC007541.1-201ENST00000570282 1469 ntBASIC15.48■□□□□ 0.07
RNF31Q96EP0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 AL080243.2-201ENST00000418783 582 ntBASIC15.48■□□□□ 0.07
RNF31Q96EP0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 AC244107.1-201ENST00000442033 332 ntBASIC15.48■□□□□ 0.07
RNF31Q96EP0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 HLA-V-204ENST00000476601 1289 ntBASIC15.48■□□□□ 0.07
RNF31Q96EP0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 AC135586.1-201ENST00000539323 574 ntBASIC15.48■□□□□ 0.07
RNF31Q96EP0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 AL132655.2-201ENST00000596276 594 ntBASIC15.48■□□□□ 0.07
RNF31Q96EP0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF31Q96EP0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 AL589702.1-201ENST00000641229 1509 ntBASIC15.48■□□□□ 0.07
RNF31Q96EP0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF31Q96EP0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 AP003680.1-201ENST00000598970 3660 ntBASIC15.47■□□□□ 0.07
RNF31Q96EP0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF31Q96EP0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RNF31Q96EP0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms