Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 PRSS29P-201ENST00000440800 595 ntBASIC15.43■□□□□ 0.06
VPS33AQ96AX1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 AF186996.4-201ENST00000467186 377 ntBASIC15.43■□□□□ 0.06
VPS33AQ96AX1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 AC090616.6-203ENST00000579186 1945 ntBASIC15.43■□□□□ 0.06
VPS33AQ96AX1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 AC105250.1-201ENST00000509378 2057 ntBASIC15.42■□□□□ 0.06
VPS33AQ96AX1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.42■□□□□ 0.06
VPS33AQ96AX1 KRT18P67-201ENST00000432816 1264 ntBASIC15.42■□□□□ 0.06
VPS33AQ96AX1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 AC092910.1-201ENST00000482027 1129 ntBASIC15.42■□□□□ 0.06
VPS33AQ96AX1 AC108751.1-201ENST00000490852 363 ntBASIC15.42■□□□□ 0.06
VPS33AQ96AX1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 FAM215A-202ENST00000632077 792 ntBASIC15.42■□□□□ 0.06
VPS33AQ96AX1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 AC134407.2-201ENST00000625089 1978 ntBASIC15.42■□□□□ 0.06
VPS33AQ96AX1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS33AQ96AX1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 RPS2P28-201ENST00000314255 741 ntBASIC15.41■□□□□ 0.06
VPS33AQ96AX1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 IGLL3P-201ENST00000412472 434 ntBASIC15.41■□□□□ 0.06
VPS33AQ96AX1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.41■□□□□ 0.06
VPS33AQ96AX1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 AL121912.1-201ENST00000603683 238 ntBASIC15.41■□□□□ 0.06
VPS33AQ96AX1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms