Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.15□□□□□ -0.14
AP3S1Q92572 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
AP3S1Q92572 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.15□□□□□ -0.14
AP3S1Q92572 PAWRP1-201ENST00000451083 565 ntBASIC14.15□□□□□ -0.14
AP3S1Q92572 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.15□□□□□ -0.14
AP3S1Q92572 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.15□□□□□ -0.14
AP3S1Q92572 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.15□□□□□ -0.14
AP3S1Q92572 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.15□□□□□ -0.14
AP3S1Q92572 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.15□□□□□ -0.14
AP3S1Q92572 AC073592.4-201ENST00000623827 446 ntBASIC14.15□□□□□ -0.14
AP3S1Q92572 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
AP3S1Q92572 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.15□□□□□ -0.14
AP3S1Q92572 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.15□□□□□ -0.14
AP3S1Q92572 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.15□□□□□ -0.14
AP3S1Q92572 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S1Q92572 AJ011931.1-201ENST00000618749 2492 ntBASIC14.15□□□□□ -0.14
AP3S1Q92572 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
AP3S1Q92572 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.15□□□□□ -0.15
AP3S1Q92572 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
AP3S1Q92572 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 AC092127.1-201ENST00000567093 3455 ntBASIC14.14□□□□□ -0.15
AP3S1Q92572 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.14□□□□□ -0.15
AP3S1Q92572 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 AC148477.4-201ENST00000613430 1793 ntBASIC14.14□□□□□ -0.15
AP3S1Q92572 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 SLC22A20-204ENST00000530038 1673 ntBASIC14.14□□□□□ -0.15
AP3S1Q92572 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.14□□□□□ -0.15
AP3S1Q92572 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.14□□□□□ -0.15
AP3S1Q92572 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.14□□□□□ -0.15
AP3S1Q92572 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 HCG4-201ENST00000418983 998 ntBASIC14.14□□□□□ -0.15
AP3S1Q92572 PMS2P1-201ENST00000431037 1228 ntBASIC14.14□□□□□ -0.15
AP3S1Q92572 AC245100.5-201ENST00000452108 331 ntBASIC14.14□□□□□ -0.15
AP3S1Q92572 SNORA78-201ENST00000459373 127 ntBASIC14.14□□□□□ -0.15
AP3S1Q92572 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
AP3S1Q92572 YBX1P2-201ENST00000489612 999 ntBASIC14.14□□□□□ -0.15
AP3S1Q92572 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
AP3S1Q92572 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.14□□□□□ -0.15
AP3S1Q92572 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.14□□□□□ -0.15
AP3S1Q92572 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.14□□□□□ -0.15
AP3S1Q92572 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.14□□□□□ -0.15
AP3S1Q92572 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
AP3S1Q92572 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.14□□□□□ -0.15
AP3S1Q92572 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.14□□□□□ -0.15
AP3S1Q92572 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
AP3S1Q92572 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
AP3S1Q92572 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.14□□□□□ -0.15
AP3S1Q92572 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 NCF1C-201ENST00000438382 1427 ntBASIC14.14□□□□□ -0.15
AP3S1Q92572 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.14□□□□□ -0.15
AP3S1Q92572 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
AP3S1Q92572 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.14□□□□□ -0.15
AP3S1Q92572 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
AP3S1Q92572 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S1Q92572 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
AP3S1Q92572 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.13□□□□□ -0.15
AP3S1Q92572 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.13□□□□□ -0.15
AP3S1Q92572 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms