Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 AL161772.1-201ENST00000610494 4412 ntBASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 UPF3AP3-201ENST00000420996 769 ntBASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 PAWRP1-201ENST00000451083 565 ntBASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 AC096734.2-201ENST00000562054 433 ntBASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 AC139530.3-201ENST00000620344 690 ntBASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 AP001350.2-201ENST00000625104 1094 ntBASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 OR2I1P-210ENST00000642037 4691 ntBASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RAB40AQ8WXH6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 OR7E47P-204ENST00000575924 449 ntBASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40AQ8WXH6 LINC01101-201ENST00000622953 1884 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms